Molecule type: protein
Alternative name(s): PATJ CIPP
External ID: Q8NI35


Modifications

Variants

Modification: none

A specific modification is selected.

See all possible variants
Fragments

Fragments

Fragment: 238-335

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)


Showing 1 to 25 of 452 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.

pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
CNTNAP4 Q9C0A0 1299-1308 VNENQKEYFF 5.40 N/D 0.79 0 1 / 1
GYPC P04921 119-128 GDSSRKEYFI 4.99 N/D 0.61 0 1 / 1
NRXN3 Q9HDB5 628-637 QKNKDREYYV 4.97 N/D 0.59 0 1 / 1
NRXN3 Q9Y4C0 1634-1643 rs746444206 QKNKDKEYYV 4.92 N/D 0.57 0 1 / 1
NECTIN3 Q9NQS3 540-549 SVISRREWYV 4.91 N/D 0.56 0 1 / 1
NECTIN1 Q15223 508-517 SFISKKEWYV 4.80 N/D 0.5 0 1 / 1
JAG1 P78504 1209-1218 QSLNRMEYIV 4.77 N/D 0.49 0 1 / 1
CNTNAP2 Q9UHC6 1322-1331 IDESKKEWLI 4.67 N/D 0.43 0 1 / 1
MCM7 P33993 710-719 NASRTRITFV 4.61 N/D 0.4 0 1 / 1
HPV51-E6 P26554 142-151 RTRQRNETQV 4.60 N/D 0.1 0 1 / 2
NRXN1 Q9ULB1 1468-1477 KKNKDKEYYV 4.55 N/D 0.37 0 1 / 1
CSPG4 Q6UVK1 2313-2322 PALKNGQYWV 4.38 N/D 0.29 0 1 / 1
FRMPD4 Q14CM0 1313-1322 RLPKIKETTV 4.37 N/D 0.06 0 1 / 4
HPV33-E6 P06427 140-149 SRSRRRETAL 4.32 N/D 0.04 0 1 / 3
FCHSD2 O94868 731-740 KIEDVEITLV 4.30 N/D 0.25 0 1 / 1
ARHGEF16 Q5VV41 700-709 MERLRVETDV 4.30 N/D 0.07 0 1 / 2
KCNV1 Q6PIU1 491-500 RSSGGDDFWF 4.28 N/D 0.24 0 1 / 1
AMOTL1 Q8IY63 947-956 PDGEMMEVLI 4.27 N/D 0.24 0 1 / 1
DOCK4 Q8N1I0 1957-1966 RPLPRKVSQL 4.24 N/D 0.05 0 1 / 2
GRASP Q7Z6J2 386-395 RSLEEEESQL 4.22 N/D 0.08 0 1 / 2
TMEM215 Q68D42 226-235 QGRWDHETIV 4.22 N/D 0.22 0 1 / 1
RASSF6 Q6ZTQ3 360-369 KLVIKTETTV 4.20 N/D 0.06 0 1 / 2
GAS2L2 Q8NHY3 871-880 PLPPEEESWV 4.17 N/D 0.2 0 1 / 1
RNF130 Q86XS8 410-419 SLNANEVEWF 4.09 N/D 0.18 0 1 / 1
USH1C Q9Y6N9 543-552 KEYDDELTFF 4.09 N/D 0.17 0 1 / 1
Showing 1 to 25 of 452 results
Showing 1 to 25 of 452 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.



This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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