Interaction Details


Details of experiments between Q8NI35 and Q9C0A0
Note that the results of all experiments are listed, regardless of the modification states of the fragments.


Experiment series 1

Protein A

Protein: Inadl
Fragment: 238-335
Site: PDZ_2
Construct: his6-MBP-TEVsite-PDZ

Protein B

Protein: CNTNAP4
Fragment: 1299-1308
Site: PBM
Sequence: VNENQKEYFF
Construct: Biotin-Ahx-VNENQKEYFF
Average holdup BI: 0.79
Normalized holdup BI: 0.79
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pKd: 5.4
PUBMED ID: 36115835

Experiment series 2

Protein A

Protein: Inadl
Fragment: 359-469
Site: PDZ_3
Construct: his6-MBP-TEVsite-PDZ

Protein B

Protein: CNTNAP4
Fragment: 1299-1308
Site: PBM
Sequence: VNENQKEYFF
Construct: Biotin-Ahx-VNENQKEYFF
Average holdup BI: 0.11
Normalized holdup BI: 0.13
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pKd: 3.95
PUBMED ID: 36115835

Experiment series 3

Protein A

Protein: Inadl
Fragment: 1058-1167
Site: PDZ_6
Construct: his6-MBP-TEVsite-PDZ

Protein B

Protein: CNTNAP4
Fragment: 1299-1308
Site: PBM
Sequence: VNENQKEYFF
Construct: Biotin-Ahx-VNENQKEYFF
Average holdup BI: 0.1
Normalized holdup BI: 0.11
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pKd: 3.86
PUBMED ID: 36115835

Experiment series 4

Protein A

Protein: Inadl
Fragment: 113-229
Site: PDZ_1
Construct: his6-MBP-TEVsite-PDZ

Protein B

Protein: CNTNAP4
Fragment: 1299-1308
Site: PBM
Sequence: VNENQKEYFF
Construct: Biotin-Ahx-VNENQKEYFF
Average holdup BI: 0.08
Normalized holdup BI: 0.08
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pKd: 3.72
PUBMED ID: 36115835

Experiment series 5

Protein A

Protein: Inadl
Fragment: 673-780
Site: PDZ_5
Construct: his6-MBP-TEVsite-PDZ

Protein B

Protein: CNTNAP4
Fragment: 1299-1308
Site: PBM
Sequence: VNENQKEYFF
Construct: Biotin-Ahx-VNENQKEYFF
Average holdup BI: 0.07
Normalized holdup BI: 0.07
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pKd: 3.61
PUBMED ID: 36115835

Experiment series 6

Protein A

Protein: Inadl
Fragment: 1425-1530
Site: PDZ_8
Construct: his6-MBP-TEVsite-PDZ

Protein B

Protein: CNTNAP4
Fragment: 1299-1308
Site: PBM
Sequence: VNENQKEYFF
Construct: Biotin-Ahx-VNENQKEYFF
Average holdup BI: -0.05
Normalized holdup BI: -0.05
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
PUBMED ID: 36115835

Experiment series 7

Protein A

Protein: Inadl
Fragment: 1530-1615
Site: PDZ_9
Construct: his6-MBP-TEVsite-PDZ

Protein B

Protein: CNTNAP4
Fragment: 1299-1308
Site: PBM
Sequence: VNENQKEYFF
Construct: Biotin-Ahx-VNENQKEYFF
Average holdup BI: -0.01
Normalized holdup BI: -0.01
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
PUBMED ID: 36115835

Experiment series 8

Protein A

Protein: Inadl
Fragment: 1673-1763
Site: PDZ_10
Construct: his6-MBP-TEVsite-PDZ

Protein B

Protein: CNTNAP4
Fragment: 1299-1308
Site: PBM
Sequence: VNENQKEYFF
Construct: Biotin-Ahx-VNENQKEYFF
Average holdup BI: -0.04
Normalized holdup BI: -0.04
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
PUBMED ID: 36115835

Experiment series 9

Protein A

Protein: Inadl
Fragment: 547-651
Site: PDZ_4
Construct: his6-MBP-TEVsite-PDZ

Protein B

Protein: CNTNAP4
Fragment: 1299-1308
Site: PBM
Sequence: VNENQKEYFF
Construct: Biotin-Ahx-VNENQKEYFF
Average holdup BI: -0.01
Normalized holdup BI: -0.01
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
PUBMED ID: 36115835