Molecule type: protein
Alternative name(s): PATJ CIPP
External ID: Q8NI35


Modifications

Variants

Modification: none

A specific modification is selected.

See all possible variants
Fragments

Fragments

Fragment: 113-229

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)


Showing 1 to 25 of 452 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.

pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
YAP1 P46937 495-504 LDKESFLTWL 4.54 N/D 0.37 0 1 / 1
WWTR1 Q9GZV5 391-400 NKSEPFLTWL 4.52 N/D 0.35 0 1 / 1
TRPV6 Q9H1D0 756-765 EDGESWEYQI 4.41 N/D 0.3 0 1 / 1
CACNA1D Q01668 2152-2161 ADEMICITTL 4.33 N/D 0.27 0 1 / 1
NECTIN3 Q9NQS3 540-549 SVISRREWYV 4.25 N/D 0.23 0 1 / 1
SLCO1C1 Q9NYB5 703-712 NYWPGKETQL 4.12 N/D 0.02 0 1 / 4
GYPC P04921 119-128 GDSSRKEYFI 4.12 N/D 0.19 0 1 / 1
CSPG4 Q6UVK1 2313-2322 PALKNGQYWV 4.09 N/D 0.18 0 1 / 1
GJC1 P36383 387-396 SGDGKTSVWI 4.03 N/D 0.16 0 1 / 1
EFNB3 Q15768 331-340 QSPPNIYYKV 3.99 N/D 0.14 0 1 / 1
CNTNAP2 Q9UHC6 1322-1331 IDESKKEWLI 3.93 N/D 0.13 0 1 / 1
CIB2 O75838 178-187 DFLSTFHIRI 3.91 N/D 0.12 0 1 / 1
NECTIN1 Q15223 508-517 SFISKKEWYV 3.91 N/D 0.12 0 1 / 1
BCR P11274 1262-1271 RQSILFSTEV 3.88 N/D 0.12 0 1 / 1
ADAM22 Q9P0K1 897-906 QSARLWETSI 3.84 N/D 0.11 0 1 / 1
EFNB1 P52799 324-333 QSPANIYYKV 3.82 N/D 0.1 0 1 / 1
PDZRN3 Q9UPQ7 1057-1066 YNSFLSVTTV 3.82 N/D 0.1 0 1 / 1
PTEN P60484 393-403 EDQHTQITKV 3.77 N/D 0.06 0 1 / 2
ASIC3 Q9UHC3 522-531 HRTCYLVTQL 3.76 0.24 0.1 0 2 / 3
PTEN P60484 393-403 (ALY)402 EDQHTQITKV 3.73 0.12 0.05 0 2 / 4
ABRAXAS2 Q15018 406-415 DPRNTQTSQI 3.72 N/D 0.08 0 1 / 1
CNTNAP4 Q9C0A0 1299-1308 VNENQKEYFF 3.72 N/D 0.08 0 1 / 1
OTULIN Q96BN8 343-352 PVRVCEETSL 3.70 N/D 0.03 0 1 / 2
ATP2B1 P20020 1211-1220 SPLHSLETSL 3.69 N/D 0.03 0 1 / 2
JAG1 P78504 1209-1218 QSLNRMEYIV 3.69 N/D 0.08 0 1 / 1
Showing 1 to 25 of 452 results
Showing 1 to 25 of 452 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.



This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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