FRMPD2

Molecule type: protein
Alternative name(s): PDZD5C PDZK4 PDZK5C
External ID: Q68DX3


Modifications

Variants

Modification: none

A specific modification is selected.

See all possible variants
Fragments

Fragments

Fragment: 1073-1166

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)

Showing 1 to 25 of 452 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
NECTIN3 Q9NQS3 540-549 — SVISRREWYV 4.44 N/D 0.32 0 1 / 1
NRXN3 Q9HDB5 628-637 — QKNKDREYYV 4.38 N/D 0.29 0 1 / 1
JAG1 P78504 1209-1218 — QSLNRMEYIV 4.36 N/D 0.28 0 1 / 1
NECTIN1 Q15223 508-517 — SFISKKEWYV 4.31 N/D 0.26 0 1 / 1
CLDN2 P57739 221-230 — FNSYSLTGYV 4.28 N/D 0.24 0 1 / 1
NRXN3 Q9Y4C0 1634-1643 rs746444206 QKNKDKEYYV 4.23 N/D 0.22 0 1 / 1
NRXN1 Q9ULB1 1468-1477 — KKNKDKEYYV 4.17 N/D 0.2 0 1 / 1
GRASP Q7Z6J2 386-395 — RSLEEEESQL 4.08 N/D 0.09 0 1 / 2
GAS2L2 Q8NHY3 871-880 — PLPPEEESWV 4.04 N/D 0.16 0 1 / 1
PLCB4 Q15147 1166-1175 — EMDRRPATVV 4.01 N/D 0.08 0 1 / 2
TMEM215 Q68D42 226-235 — QGRWDHETIV 3.97 N/D 0.14 0 1 / 1
PFKM P08237 771-780 — TRKRSGEAAV 3.97 N/D 0.14 0 1 / 1
ABCA1 O95477 2252-2261 — QDEKVKESYV 3.90 N/D 0.05 0 1 / 2
CNKSR2 Q8WXI2 1025-1034 — HTHSYIETHV 3.87 N/D 0.11 0 1 / 1
HPV30-E6 P36809 144-153 — RHTTSTETAV 3.87 N/D 0.03 0 1 / 2
NOS1AP O75052 497-506 — GDGLDDEIAV 3.82 N/D 0.1 0 1 / 1
FZD10 Q9ULW2 572-581 — EIPAQSPTCV 3.77 N/D 0.09 0 1 / 1
HTLV1-TAX1 P03409 344-353 — SEKHFRETEV 3.77 N/D 0.01 0 2 / 4
GYPC P04921 119-128 — GDSSRKEYFI 3.76 N/D 0.09 0 1 / 1
FZD1 Q9UP38 638-647 — TNSKQGETTV 3.74 N/D 0.09 0 1 / 1
GJD2 Q9UKL4 312-321 — RTQSSDSAYV 3.71 N/D 0.08 0 1 / 1
TRAF7 Q6Q0C0 661-670 — VDSTVKVWTC 3.71 N/D 0.08 0 1 / 1
DGKZ Q13574 919-928 — IQREDQETAV 3.71 N/D 0.04 0 2 / 4
SDC2 P34741 192-201 — QKAPTKEFYA 3.67 N/D 0.08 0 1 / 1
XKR7 Q5GH72 570-579 — QELLEYETTV 3.63 N/D 0.07 0 1 / 1
Showing 1 to 25 of 452 results
Showing 1 to 25 of 452 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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