LNX1

Molecule type: protein
Alternative name(s): LNX PDZRN2 UNQ574/PRO1136
External ID: Q8TBB1


Modifications

Variants

Modification: none

A specific modification is selected.

See all possible variants
Fragments

Fragments

Fragment: 371-470

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)

Showing 1 to 25 of 452 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
TRAF7 Q6Q0C0 661-670 — VDSTVKVWTC 5.30 N/D 0.75 0 1 / 1
PPFIA1 Q13136 1193-1202 — DSATVRTYSC 4.83 N/D 0.52 0 1 / 1
PTEN P60484 391-403 — EDQHTQITKV 4.71 N/D 0.44 0 1 / 1
FAM167B Q9BTA0 154-163 — NISARRFTLC 4.62 N/D 0.41 0 1 / 1
NECTIN3 Q9NQS3 540-549 — SVISRREWYV 4.59 N/D 0.39 0 1 / 1
MARCHF4 Q9P2E8 401-410 — RELVMRVTTV 4.58 N/D 0.39 0 1 / 1
MARCHF9 Q86YJ5 337-346 — REVVMRVTTV 4.56 N/D 0.37 0 1 / 1
FCHSD2 O94868 731-740 — KIEDVEITLV 4.55 N/D 0.37 0 1 / 1
EPHB3 P54753 989-998 — QMNQTLPVQV 4.53 N/D 0.36 0 1 / 1
JAG1 P78504 1209-1218 — QSLNRMEYIV 4.51 N/D 0.35 0 1 / 1
PBK Q96KB5 313-322 — HIVEALETDV 4.46 N/D 0.08 0 1 / 2
NECTIN1 Q15223 508-517 — SFISKKEWYV 4.46 N/D 0.32 0 1 / 1
AGMAT Q9BSE5 343-352 — LCALPKVTTV 4.42 N/D 0.28 0 2 / 2
TTC24 A2A3L6 573-582 — PMESGICTIV 4.37 N/D 0.28 0 1 / 1
EPHA7 Q15375 989-998 — LHLHGTGIQV 4.37 N/D 0.28 0 1 / 1
HPV59-E6 Q81964 151-160 — QRQARSETLV 4.35 0.10 0.16 0 2 / 2
FAM71C Q8NEG0 232-241 — STYCDYTIEI 4.35 N/D 0.27 0 1 / 1
CSPG4 Q6UVK1 2313-2322 — PALKNGQYWV 4.27 N/D 0.24 0 1 / 1
JAM1 Q9Y624 290-299 — EFKQTSSFLV 4.26 N/D 0.24 0 1 / 1
TRIM29 Q14134 579-588 — KSGKQTMLVV 4.23 N/D 0.23 0 1 / 1
TMEM215 Q68D42 226-235 — QGRWDHETIV 4.23 N/D 0.23 0 1 / 1
PDZRN3 Q9UPQ7 1057-1066 — YNSFLSVTTV 4.23 N/D 0.23 0 1 / 1
CLDN2 P57739 221-230 — FNSYSLTGYV 4.19 N/D 0.21 0 1 / 1
DGKK Q5KSL6 1262-1271 — DPLTPSRSQL 4.17 N/D 0.05 0 1 / 2
ATP2B4 P23634 1232-1241 — SSLQSLETSV 4.15 0.45 0.09 0 2 / 3
Showing 1 to 25 of 452 results
Showing 1 to 25 of 452 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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