Molecule type: protein
Alternative name(s): PATJ CIPP
External ID: Q8NI35


Modifications

Variants

Modification: none

A specific modification is selected.

See all possible variants
Fragments

Fragments

Fragment: 673-780

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)


Showing 1 to 25 of 452 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.

pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
NECTIN3 Q9NQS3 540-549 SVISRREWYV 5.43 N/D 0.8 0 1 / 1
GYPC P04921 119-128 GDSSRKEYFI 5.16 N/D 0.69 0 1 / 1
GJD4 Q96KN9 361-370 HLRARKSEWV 5.11 N/D 0.66 0 1 / 1
JAG1 P78504 1209-1218 QSLNRMEYIV 4.86 N/D 0.54 0 1 / 1
NECTIN1 Q15223 508-517 SFISKKEWYV 4.82 N/D 0.51 0 1 / 1
OR10G3 Q8NGC4 304-313 LRSPRTPSEV 4.73 N/D 0.46 0 1 / 1
NRXN3 Q9HDB5 628-637 QKNKDREYYV 4.64 N/D 0.42 0 1 / 1
NRXN3 Q9Y4C0 1634-1643 rs746444206 QKNKDKEYYV 4.55 N/D 0.37 0 1 / 1
MMP24 Q9Y5R2 636-645 YYKRPVQEWV 4.47 N/D 0.33 0 1 / 1
PBK Q96KB5 313-322 HIVEALETDV 4.38 N/D 0.06 0 1 / 2
DOCK4 Q8N1I0 1957-1966 RPLPRKVSQL 4.37 N/D 0.09 0 1 / 2
MCM7 P33993 710-719 NASRTRITFV 4.34 N/D 0.27 0 1 / 1
PLCB4 Q15147 1166-1175 EMDRRPATVV 4.31 0.01 0.26 0 2 / 2
CSPG4 Q6UVK1 2313-2322 PALKNGQYWV 4.31 N/D 0.26 0 1 / 1
CLDN8 P56748 216-225 PSVYSRSQYV 4.31 N/D 0.26 0 1 / 1
GAS2L2 Q8NHY3 871-880 PLPPEEESWV 4.29 N/D 0.25 0 1 / 1
GPR6 P46095 353-362 PFRSRSPSEV 4.29 N/D 0.25 0 1 / 1
NRXN1 Q9ULB1 1468-1477 KKNKDKEYYV 4.25 N/D 0.23 0 1 / 1
IQSEC2 Q5JU85 1479-1488 AKPSRISTVV 4.21 N/D 0.22 0 1 / 1
EPHB3 P54753 989-998 QMNQTLPVQV 4.10 N/D 0.18 0 1 / 1
RGS12 O14924 1438-1447 KTSAHHATFV 4.05 0.19 0.17 0 2 / 2
HPV49-L2 P36762 512-521 RRRKRKRTYL 4.05 N/D 0.16 0 1 / 1
ABCC4 O15439 1316-1325 STLTIFETAL 4.05 N/D 0.05 0 1 / 5
EPHA7 Q15375 989-998 LHLHGTGIQV 4.04 N/D 0.16 0 1 / 1
ATRNL1 Q5VV63 1370-1379 HLSTRQGTCV 4.04 N/D 0.16 0 1 / 1
Showing 1 to 25 of 452 results
Showing 1 to 25 of 452 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.



This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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