TRIM50

Molecule type: protein
Alternative name(s): TRIM50A
External ID: Q86XT4


Modifications

Variants

Modification: none

This selection has only 1 modification in the database.

Fragments

Fragments

Fragment: 478-487

This selection has only 1 possible fragment in the database.

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)

Showing 1 to 25 of 133 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
MAST2 Q6P0Q8 1102-1193 — — 4.73 N/D 0.46 0 1 / 1
APBA1 Q02410 743-822 — — 4.06 N/D 0.15 0 1 / 1
PARD3B Q8TEW8 184-299 — — 4.06 N/D 0.17 0 1 / 1
PDZD7 Q9H5P4 858-953 — — 4.04 N/D 0.15 0 1 / 1
GRASP Q7Z6J2 96-193 — — 4.00 N/D 0.15 0 1 / 1
NHERF4 Q86UT5 106-208 — — 3.98 N/D 0.14 0 1 / 1
MAST1 Q9Y2H9 965-1056 — — 3.97 N/D 0.07 0 1 / 1
DFNB31 Q9P202 813-904 — — 3.93 N/D 0.13 0 1 / 1
NHERF2 Q15599 142-238 — — 3.86 N/D 0.11 0 1 / 1
LIN7C Q9NUP9 85-176 — — 3.82 N/D 0.09 0 1 / 1
HTRA4 P83105 368-476 — — 3.75 N/D 0.09 0 1 / 1
NHERF3 Q5T2W1 375-459 — — 3.70 N/D 0.08 0 1 / 1
MPP6 Q9NZW5 126-208 — — 3.63 N/D 0.07 0 1 / 1
FRMPD4 Q14CM0 67-160 — — 3.61 N/D 0.07 0 1 / 1
NHERF3 Q5T2W1 2-107 — — 3.53 N/D 0.05 0 1 / 1
AHNAK1 Q09666 2-99 — — not detectable N/D -0.02 0 0 / 1
APBA1 Q02410 655-741 — — not detectable N/D -0 0 0 / 1
APBA2 Q99767 565-653 — — not detectable N/D 0.01 0 0 / 1
APBA2 Q99767 655-735 — — not detectable N/D -0.02 0 0 / 1
APBA3 O96018 390-479 — — not detectable N/D -0 0 0 / 1
ARHGAP21 Q5T5U3 47-159 — — not detectable N/D 0.04 0 0 / 1
ARHGEF11 O15085 41-126 — — not detectable N/D 0.01 0 0 / 1
ARHGEF12 Q9NZN5 67-151 — — not detectable N/D 0.02 0 0 / 1
CARD11 Q9BXL7 660-756 — — not detectable N/D -0.01 0 0 / 1
CASK O14936 487-570 — — not detectable N/D -0 0 0 / 1
Showing 1 to 25 of 133 results
Showing 1 to 25 of 133 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


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