NHERF3

Molecule type: protein
Alternative name(s): PDZK1 CAP70 PDZD1
External ID: Q5T2W1


Modifications

Variants

Modification: none

This selection has only 1 modification in the database.

Fragments

Fragments

Fragment: 2-107

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)

Showing 1 to 25 of 454 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
SLC15A5 A6NIM6 570-579 — SSIDLWETAL 6.31 0.48 0.84 0 5 / 5
SLC22A12 Q96S37 544-553 — GNSVLKSTQF 6.17 N/D 0.91 0 1 / 1
SLC22A11 Q9NSA0 541-550 — EAVTVESTSL 6.10 N/D 0.9 0 1 / 1
ASNSD1 Q9NWL6 634-643 — NLSIEKETKL 6.04 N/D 0.89 0 1 / 1
AKAP10 O43572 653-662 — DQPLEKSTKL 6.02 N/D 0.89 0 1 / 1
ABCC4 O15439 1316-1325 — STLTIFETAL 5.92 0.17 0.85 0 6 / 6
COMMD3 Q9UBI1 186-195 — SKSLERATQL 5.82 N/D 0.86 0 1 / 1
BCR P11274 1262-1271 — RQSILFSTEV 5.78 N/D 0.85 0 1 / 1
OTULIN Q96BN8 343-352 — PVRVCEETSL 5.76 0.16 0.84 0 2 / 2
TBC1D10A Q9BXI6 499-508 — TSQESEDTYL 5.69 N/D 0.83 0 1 / 1
GUCY1A2 P33402 723-732 — GTMFLRETSL 5.64 N/D 0.82 0 1 / 1
RPS6KA3 P51812 731-740 — GIKKITSTAL 5.64 N/D 0.82 0 1 / 1
PTH1R Q03431 584-593 — LLQEEWETVM 5.63 N/D 0.82 0 1 / 1
FRMPD1 Q5SYB0 1569-1578 — TQKFRASTAL 5.59 0.12 0.79 0 2 / 2
MAPK12 P53778 358-367 — GARVSKETPL 5.58 0.02 0.8 0 2 / 2
PLCB2 Q00722 1176-1185 — AKADAQESRL 5.58 N/D 0.8 0 1 / 1
HPV33-E6 P06427 140-149 — SRSRRRETAL 5.56 0.07 0.72 0 3 / 3
SLCO1C1 Q9NYB5 703-712 — NYWPGKETQL 5.53 0.33 0.67 0 6 / 6
CRHR1 P34998 435-444 — FHSIKQSTAV 5.52 N/D 0.79 0 1 / 1
SLC26A3 P40879 755-764 — VYEVPVETKF 5.51 N/D 0.78 0 1 / 1
KCNT2 Q6UVM3 1126-1135 — GQDSREETQL 5.47 N/D 0.71 0 1 / 1
ATP2A2 P16615 1033-1042 — YLEPVLSSEL 5.47 N/D 0.77 0 1 / 1
MYPN Q86TC9 1311-1320 — SRSVVESDEL 5.44 N/D 0.76 0 1 / 1
GNG4 P50150 66-75 — REKKFFCTIL 5.43 N/D 0.76 0 1 / 1
TMIGD1 Q6UXZ0 253-262 — DKDPHSETAL 5.42 N/D 0.75 0 1 / 1
Showing 1 to 25 of 454 results
Showing 1 to 25 of 454 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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