PDZD7

Molecule type: protein
Alternative name(s): PDZK7
External ID: Q9H5P4


Modifications

Variants

Modification: none

This selection has only 1 modification in the database.

Fragments

Fragments

Fragment: 858-953

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)

Showing 1 to 25 of 456 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
RPS6KA1 Q15418 729-735 — RVRKLPSTTL 6.10 N/D 0 0 3 / 3
RPS6KA1 Q15418 729-735 (SEP)732 RVRKLPSTTL 5.74 N/D 0 0 3 / 3
PTEN P60484 393-403 (ALY)402 EDQHTQITKV 5.70 0.12 0.8 0 7 / 7
EXOC4 Q96A65 965-974 — ATKDKKITTV 5.64 N/D 0.82 0 1 / 1
MAP4 P27816 1143-1152 — LDSQIQETSI 5.63 N/D 0.68 0 1 / 1
ARHGAP6 O43182 965-974 — NPDALPETLV 5.61 N/D 0.69 0 1 / 1
PDZRN3 Q9UPQ7 1057-1066 — YNSFLSVTTV 5.58 N/D 0.71 0 1 / 1
CACNA1D Q01668 2152-2161 — ADEMICITTL 5.57 N/D 0.8 0 1 / 1
LRRC4 Q9HBW1 644-653 — TKDKVQETQI 5.51 N/D 0.79 0 1 / 1
PTEN P60484 391-403 — EDQHTQITKV 5.49 N/D 0.81 0 1 / 1
SLC15A5 A6NIM6 570-579 — SSIDLWETAL 5.47 0.22 0.57 0 5 / 5
FCHSD2 O94868 731-740 — KIEDVEITLV 5.46 N/D 0.77 0 1 / 1
GNG4 P50150 66-75 — REKKFFCTIL 5.44 N/D 0.76 0 1 / 1
ASIC3 Q9UHC3 522-531 — HRTCYLVTQL 5.43 0.07 0.72 0 3 / 3
AGMAT Q9BSE5 343-352 — LCALPKVTTV 5.41 N/D 0.63 0 1 / 1
RPS6KA1 Q15418 683-735 — RVRKLPSTTL 5.40 N/D 0 0 3 / 3
LRRC4B Q9NT99 704-713 — SKENVQETQI 5.39 N/D 0.74 0 1 / 1
ABCA1 O95477 2252-2261 — QDEKVKESYV 5.32 0.03 0.68 0 2 / 2
MARCHF4 Q9P2E8 401-410 — RELVMRVTTV 5.28 N/D 0.71 0 1 / 1
MCM7 P33993 710-719 — NASRTRITFV 5.26 N/D 0.7 0 1 / 1
MARCHF9 Q86YJ5 337-346 — REVVMRVTTV 5.24 N/D 0.69 0 1 / 1
TMEM225B P0DP42 212-221 — ETQVTAETVI 5.23 N/D 0.69 0 1 / 1
TTC24 A2A3L6 573-582 — PMESGICTIV 5.23 N/D 0.68 0 1 / 1
DACT1 Q9NYF0 827-836 — SGSLKLMTTV 5.22 N/D 0.68 0 1 / 1
PLEKHA1 Q9HB21 395-404 — DDASLPVSDV 5.22 N/D 0.68 0 1 / 1
Showing 1 to 25 of 456 results
Showing 1 to 25 of 456 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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