LIN7C

Molecule type: protein
Alternative name(s): MALS3 VELI3
External ID: Q9NUP9


Modifications

Variants

Modification: none

This selection has only 1 modification in the database.

Fragments

Fragments

Fragment: 85-176

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)

Showing 1 to 25 of 452 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
FRMPD4 Q14CM0 1313-1322 — RLPKIKETTV 5.14 0.11 0.47 0 5 / 5
SLC15A5 A6NIM6 570-579 — SSIDLWETAL 5.03 0.13 0.31 0 5 / 6
LNX2 Q8N448 681-690 — TVICWPGSLV 4.98 N/D 0.4 0 1 / 1
CYSLTR2 Q9NS75 337-346 — SVWLRKETRV 4.96 0.23 0.42 0 4 / 4
GUCY1A2 P33402 723-732 — GTMFLRETSL 4.83 N/D 0.47 0 1 / 1
DOCK4 Q8N1I0 1957-1966 — RPLPRKVSQL 4.80 N/D 0.18 0 1 / 2
SLCO1C1 Q9NYB5 703-712 — NYWPGKETQL 4.79 0.10 0.25 0 5 / 6
XKR7 Q5GH72 570-579 — QELLEYETTV 4.79 N/D 0.45 0 1 / 1
ATP2B4 P23634 1232-1241 — SSLQSLETSV 4.73 0.07 0.31 0 3 / 3
ADGRA3 Q8IWK6 1312-1321 — TGLWKHETTV 4.60 N/D 0.36 0 1 / 1
FZD2 Q14332 556-565 — TNSRHGETTV 4.60 N/D 0.36 0 1 / 1
ABCC4 O15439 1316-1325 — STLTIFETAL 4.60 0.17 0.29 0 6 / 6
DGKI O75912 1056-1065 — IGHEDLETAV 4.57 N/D 0.34 0 1 / 1
ABCA1 O95477 2252-2261 — QDEKVKESYV 4.57 0.02 0.3 0 2 / 2
HTLV1-TAX1 P03409 344-353 — SEKHFRETEV 4.52 0.11 0.29 0 5 / 5
TRPV3 Q8NET8 781-790 — EVEEFPETSV 4.51 N/D 0.32 0 1 / 1
ATP2B1 P20020 1211-1220 — SPLHSLETSL 4.50 0.04 0.26 0 3 / 3
ADAM22 Q9P0K1 897-906 — QSARLWETSI 4.50 N/D 0.31 0 1 / 1
MARCHF9 Q86YJ5 337-346 — REVVMRVTTV 4.47 N/D 0.3 0 1 / 1
FZD1 Q9UP38 638-647 — TNSKQGETTV 4.45 N/D 0.29 0 1 / 1
TMEM151B Q8IW70 557-566 — RHGSCVETSL 4.43 N/D 0.28 0 1 / 1
AGMAT Q9BSE5 343-352 — LCALPKVTTV 4.38 N/D 0.18 0 2 / 2
SCN4A P35499 1827-1836 — VRPGVKESLV 4.38 N/D 0.26 0 1 / 1
DGKZ Q13574 919-928 — IQREDQETAV 4.37 0.08 0.17 0 5 / 5
SLC2A7 Q6PXP3 503-512 — TASPAKETSF 4.36 N/D 0.25 0 1 / 1
Showing 1 to 25 of 452 results
Showing 1 to 25 of 452 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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