RAPGEF6

Molecule type: protein
Alternative name(s): PDZGEF2
External ID: Q8TEU7


Modifications

Variants

Modification: none

A specific modification is selected.

See all possible variants
Fragments

Fragments

Fragment: 525-611

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)

Showing 1 to 25 of 452 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
FRMPD4 Q14CM0 1313-1322 — RLPKIKETTV 4.51 N/D 0.04 0 1 / 3
KCNA5 P22460 604-613 — CLDTSRETDL 4.31 N/D 0.09 0 1 / 2
KCNB1 Q14721 849-858 — AHGSTRDQSI 3.91 N/D 0.12 0 1 / 1
COMMD3 Q9UBI1 186-195 — SKSLERATQL 3.85 N/D 0.11 0 1 / 1
RPS6KA1 Q15418 725-735 (SEP)732 RVRKLPSTTL 3.74 N/D 0.06 0 1 / 5
ATP2B4 P23634 1232-1241 — SSLQSLETSV 3.72 N/D -0.01 0 1 / 3
ADGRG1 Q9Y653 684-693 — SSGSTSSSRI 3.70 N/D 0.08 0 1 / 1
RPS6KA1 Q15418 725-735 — RVRKLPSTTL 3.70 N/D 0.03 0 1 / 5
GLA P06280 420-429 — TMQMSLKDLL 3.69 N/D 0.08 0 1 / 1
MAP2K2 P36507 391-400 — QPGTPTRTAV 3.67 N/D 0.03 0 1 / 2
CDK18 Q07002 465-474 — RGKNRRQSIF 3.67 N/D 0.08 0 1 / 1
HPV16-E6 P03126 149-158 — SSRTRRETQL 3.66 N/D 0.01 0 1 / 11
CACNA1D Q01668 2152-2161 — ADEMICITTL 3.65 N/D 0.07 0 1 / 1
TRPV3 Q8NET8 781-790 — EVEEFPETSV 3.64 N/D 0.07 0 1 / 1
AGMAT Q9BSE5 343-352 — LCALPKVTTV 3.63 N/D 0.07 0 2 / 2
RNF130 Q86XS8 410-419 — SLNANEVEWF 3.61 N/D 0.07 0 1 / 1
ACTN2 P35609 885-894 — SSALYGESDL 3.60 N/D 0.07 0 1 / 1
ABCC4 O15439 1316-1325 — STLTIFETAL 3.60 N/D 0.03 0 1 / 4
GAS2L2 Q8NHY3 871-880 — PLPPEEESWV 3.60 N/D 0.07 0 1 / 1
CCL24 O00175 110-119 — QRYPGNQTTC 3.58 N/D 0.06 0 1 / 1
HPV73-E6 Q82005 139-148 — SGSRPSATVV 3.57 N/D -0.09 0 1 / 2
MYOT Q9UBF9 489-498 — QSGLYESEEL 3.57 N/D 0.06 0 1 / 1
TRAF7 Q6Q0C0 661-670 — VDSTVKVWTC 3.57 N/D 0.06 0 1 / 1
GRASP Q7Z6J2 386-395 — RSLEEEESQL 3.56 N/D 0.05 0 1 / 2
CES2 O00748 550-559 — EEPEERHTEL 3.56 N/D 0.06 0 1 / 1
Showing 1 to 25 of 452 results
Showing 1 to 25 of 452 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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