LNX1

Molecule type: protein
Alternative name(s): LNX PDZRN2 UNQ574/PRO1136
External ID: Q8TBB1


Modifications

Variants

Modification: none

A specific modification is selected.

See all possible variants
Fragments

Fragments

Fragment: 500-596

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)

Showing 1 to 25 of 452 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
NECTIN3 Q9NQS3 540-549 — SVISRREWYV 4.81 N/D 0.51 0 1 / 1
NECTIN1 Q15223 508-517 — SFISKKEWYV 4.49 N/D 0.34 0 1 / 1
EFNB3 Q15768 331-340 — QSPPNIYYKV 4.47 N/D 0.33 0 1 / 1
EFNB1 P52799 324-333 — QSPANIYYKV 4.38 N/D 0.29 0 1 / 1
DGKK Q5KSL6 1262-1271 — DPLTPSRSQL 4.32 N/D 0.08 0 1 / 2
CIB2 O75838 178-187 — DFLSTFHIRI 4.28 N/D 0.24 0 1 / 1
NRXN3 Q9HDB5 628-637 — QKNKDREYYV 4.09 N/D 0.18 0 1 / 1
PRKN O60260 456-465 — VCMGDHWFDV 4.07 N/D 0.17 0 1 / 1
NRXN3 Q9Y4C0 1634-1643 rs746444206 QKNKDKEYYV 3.99 N/D 0.15 0 1 / 1
AKIP1 Q9NQ31 201-210 — GQSVDLVFPV 3.96 N/D 0.14 0 1 / 1
JAG1 P78504 1209-1218 — QSLNRMEYIV 3.96 N/D 0.14 0 1 / 1
GNG4 P50150 66-75 — REKKFFCTIL 3.95 N/D 0.14 0 1 / 1
DCAF7 P61962 333-342 — YNNCLEILRV 3.94 N/D 0.13 0 1 / 1
SLC6A3 Q01959 611-620 — QFTLRHWLKV 3.83 N/D 0.11 0 1 / 1
TRAF7 Q6Q0C0 661-670 — VDSTVKVWTC 3.80 N/D 0.1 0 1 / 1
CLDN18 P56856 252-261 — QSYPSKHDYV 3.74 N/D 0.09 0 1 / 1
PTPN18 Q99952 451-460 — RDPPAEWTRV 3.68 N/D 0.08 0 1 / 1
MAP2K2 P36507 391-400 — QPGTPTRTAV 3.67 N/D 0.03 0 1 / 2
ITK Q08881 611-620 — QLAEIAESGL 3.66 N/D 0.08 0 1 / 1
RPS6KA1 Q15418 725-735 — RVRKLPSTTL 3.66 N/D 0.07 0 1 / 5
ABCC4 O15439 1316-1325 — STLTIFETAL 3.66 N/D -0.03 0 1 / 4
BCR P11274 1262-1271 — RQSILFSTEV 3.64 N/D 0.07 0 1 / 1
HTLV1-TAX1 P03409 344-353 — SEKHFRETEV 3.64 N/D 0.03 0 1 / 4
RPS6KA1 Q15418 725-735 (SEP)732 RVRKLPSTTL 3.63 N/D 0.04 0 1 / 5
EPHB3 P54753 989-998 — QMNQTLPVQV 3.61 N/D 0.07 0 1 / 1
Showing 1 to 25 of 452 results
Showing 1 to 25 of 452 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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