LNX2

Molecule type: protein
Alternative name(s): PDZRN1
External ID: Q8N448


Modifications

Variants

Modification: none

A specific modification is selected.

See all possible variants
Fragments

Fragments

Fragment: 592-688

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)

Showing 1 to 25 of 44 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
SLC15A5 A6NIM6 570-579 — SSIDLWETAL 5.03 N/D 0.22 0 1 / 1
SLCO1C1 Q9NYB5 703-712 — NYWPGKETQL 4.73 N/D 0.2 0 1 / 1
HPV59-E6 Q81964 151-160 — QRQARSETLV 4.61 N/D 0.2 0 1 / 1
HBV-Hbc P03146 174-183 — RRSQSRESQC 3.90 N/D 0.12 0 2 / 2
SARS-Cov-E P59637 67-76 — SSEGVPDLLV 3.74 N/D 0.1 0 2 / 2
MERS-E K9N5R3 71-82 — KPPLPPDEWV 3.73 N/D 0.1 0 2 / 2
RPS6KA1 Q15418 725-735 (SEP)732 RVRKLPSTTL not detectable N/D -0.07 0 0 / 3
KCNA5 P22460 604-613 — CLDTSRETDL not detectable N/D 0 0 0 / 1
KIR3DL3 Q8N743 401-410 — PKTPPTDTSV not detectable N/D -0.01 0 0 / 1
MAP2K2 P36507 391-400 — QPGTPTRTAV not detectable N/D -0.02 0 0 / 1
PBK Q96KB5 313-322 — HIVEALETDV not detectable N/D -0.1 0 0 / 1
PTEN P60484 393-403 (ALY)402 EDQHTQITKV not detectable N/D 0.01 0 0 / 1
PTEN P60484 393-403 — EDQHTQITKV not detectable N/D -0.12 0 0 / 1
RALBP1 Q15311 646-655 — PSRDRKETSI not detectable N/D 0.08 0 0 / 1
RASSF6 Q6ZTQ3 360-369 — KLVIKTETTV not detectable N/D 0 0 0 / 1
HPV82-E6 Q9IR59 142-151 — PPRQRSETQV not detectable N/D -0.26 0 0 / 1
RPS6KA1 Q15418 725-735 — RVRKLPSTTL not detectable N/D 0.02 0 0 / 4
SARS-Cov2-3a P0DTC3 266-275 — EPTTTTSVPL not detectable N/D 0.04 0 0 / 2
SARS-CoV2-E P0DTC4 66-75 — NSSRVPDLLV not detectable N/D 0.04 0 0 / 2
SARS-Cov2-N P0DTC9 410-419 — SMSSADSTQA not detectable N/D 0 0 0 / 2
TJP2 Q9UDY2 1181-1190 — QSARYRDTEL not detectable N/D 0.04 0 0 / 1
WNV-NS5 Q9Q6P4 3424-3433 — DTTLVEDTVL not detectable N/D -0.01 0 0 / 5
PTEN P60484 391-403 — EDQHTQITKV not detectable N/D 0.09 0 0 / 1
GRASP Q7Z6J2 386-395 — RSLEEEESQL not detectable N/D 0.06 0 0 / 1
ARHGEF16 Q5VV41 700-709 — MERLRVETDV not detectable N/D -0.05 0 0 / 1
Showing 1 to 25 of 44 results
Showing 1 to 25 of 44 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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