Molecule type: protein
Alternative name(s): PSD95
External ID: P78352


Modifications

Variants

Modification: none

This selection has only 1 modification in the database.

Fragments

Fragments

Fragment: 155-249

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)


Showing 1 to 25 of 452 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.

pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
MARCHF3 Q86UD3 244-253 VKRNSKETVV 6.03 N/D 0.75 0 1 / 1
FRMPD4 Q14CM0 1313-1322 RLPKIKETTV 5.89 0.33 0.71 0 4 / 4
EVI5 O60447 801-810 RRRESYSTTV 5.87 N/D 0.73 0 1 / 1
EXOC4 Q96A65 965-974 ATKDKKITTV 5.85 N/D 0.73 0 1 / 1
NET1 Q7Z628 587-596 SGGKRKETLV 5.80 0.34 0.77 0 5 / 5
SCN4A P35499 1827-1836 VRPGVKESLV 5.71 N/D 0.71 0 1 / 1
HPV30-E6 P36809 144-153 RHTTSTETAV 5.71 0.26 0.59 0 2 / 2
ZNF599 Q96NL3 579-588 THHRKIHTRV 5.64 N/D 0.69 0 1 / 1
FAM110D Q8TAY7 262-271 ARGPPRESEV 5.63 N/D 0.69 0 1 / 1
CYSLTR2 Q9NS75 337-346 SVWLRKETRV 5.62 0.19 0.68 0 4 / 4
HTLV1-TAX1 P03409 344-353 SEKHFRETEV 5.62 0.08 0.73 0 5 / 5
HPV18-E6 P06463 149-158 RLQRRRETQV 5.53 0.29 0.72 0 6 / 6
RASSF6 Q6ZTQ3 360-369 KLVIKTETTV 5.48 0.00 0.66 0 2 / 2
DUSP10 Q9Y6W6 473-482 PKLMGVETVV 5.47 N/D 0.65 0 1 / 1
HPV35-E6 P27228 140-149 SKPTRRETEV 5.46 0.09 0.72 0 5 / 5
HPV59-E6 Q81964 151-160 QRQARSETLV 5.42 0.03 0.57 0 3 / 3
ADGRA3 Q8IWK6 1312-1321 TGLWKHETTV 5.41 N/D 0.63 0 1 / 1
PBK Q96KB5 313-322 HIVEALETDV 5.37 0.18 0.48 0 2 / 2
HPV31-E6 P17386 140-149 SRRPRTETQV 5.36 N/D 0.6 0 2 / 2
GRIN2C Q14957 1224-1233 RRISSLESEV 5.33 N/D 0.61 0 1 / 1
IQSEC2 Q5JU85 1479-1488 AKPSRISTVV 5.31 N/D 0.6 0 1 / 1
KCNA4 P22459 644-653 SNAKAVETDV 5.29 0.10 0.59 0 2 / 2
GRIN2A Q12879 1455-1464 KKMPSIESDV 5.29 N/D 0.6 0 1 / 1
AGMAT Q9BSE5 343-352 LCALPKVTTV 5.29 N/D 0.58 0 1 / 1
ARHGEF16 Q5VV41 700-709 MERLRVETDV 5.28 0.16 0.56 0 2 / 2
Showing 1 to 25 of 452 results
Showing 1 to 25 of 452 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.



This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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