Molecule type: protein
Alternative name(s): PATJ CIPP
External ID: Q8NI35


Modifications

Variants

Modification: none

A specific modification is selected.

See all possible variants
Fragments

Fragments

Fragment: 1530-1615

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)


Showing 1 to 25 of 452 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.

pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
DOCK4 Q8N1I0 1957-1966 RPLPRKVSQL 4.81 N/D 0.18 0 1 / 2
APBA1 Q02410 828-837 LTAQEQPVYI 4.60 N/D 0.4 0 1 / 1
FZD10 Q9ULW2 572-581 EIPAQSPTCV 4.60 N/D 0.4 0 1 / 1
NRXN3 Q9HDB5 628-637 QKNKDREYYV 4.56 N/D 0.37 0 1 / 1
ASIC3 Q9UHC3 522-531 HRTCYLVTQL 4.55 N/D 0.08 0 1 / 3
NECTIN3 Q9NQS3 540-549 SVISRREWYV 4.51 N/D 0.35 0 1 / 1
RGS12 O14924 1438-1447 KTSAHHATFV 4.49 0.07 0.34 0 2 / 2
NRXN3 Q9Y4C0 1634-1643 rs746444206 QKNKDKEYYV 4.41 N/D 0.3 0 1 / 1
EPHA7 Q15375 989-998 LHLHGTGIQV 4.37 N/D 0.28 0 1 / 1
CLDN8 P56748 216-225 PSVYSRSQYV 4.36 N/D 0.28 0 1 / 1
EPHB3 P54753 989-998 QMNQTLPVQV 4.34 N/D 0.27 0 1 / 1
GAS2L2 Q8NHY3 871-880 PLPPEEESWV 4.34 N/D 0.27 0 1 / 1
PKN2 Q16513 975-984 RDFDYIADWC 4.34 N/D 0.27 0 1 / 1
ABCA1 O95477 2252-2261 QDEKVKESYV 4.34 0.04 0.27 0 2 / 2
ABCC4 O15439 1316-1325 STLTIFETAL 4.33 N/D 0.05 0 1 / 5
NECTIN1 Q15223 508-517 SFISKKEWYV 4.28 N/D 0.25 0 1 / 1
WWTR1 Q9GZV5 391-400 NKSEPFLTWL 4.23 N/D 0.23 0 1 / 1
FAM71C Q8NEG0 232-241 STYCDYTIEI 4.19 N/D 0.21 0 1 / 1
MMP24 Q9Y5R2 636-645 YYKRPVQEWV 4.17 N/D 0.2 0 1 / 1
CSPG4 Q6UVK1 2313-2322 PALKNGQYWV 4.16 N/D 0.2 0 1 / 1
CLDN18 P56856 252-261 QSYPSKHDYV 4.12 N/D 0.19 0 1 / 1
SAPCD1 Q5SSQ6 139-148 TKGPRGPTRV 4.11 N/D 0.18 0 1 / 1
MCM7 P33993 710-719 NASRTRITFV 4.11 N/D 0.18 0 1 / 1
ATRNL1 Q5VV63 1370-1379 HLSTRQGTCV 4.10 N/D 0.18 0 1 / 1
BCR P11274 1262-1271 RQSILFSTEV 4.09 N/D 0.18 0 1 / 1
Showing 1 to 25 of 452 results
Showing 1 to 25 of 452 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.



This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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