Molecule type: protein
External ID: Q15700


Modifications

Variants

Modification: none

This selection has only 1 modification in the database.

Fragments

Fragments

Fragment: 418-513

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)


Showing 1 to 25 of 452 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.

pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
HTLV1-TAX1 P03409 344-353 SEKHFRETEV 5.33 0.02 0.75 0 4 / 4
CRIPT Q9P021 92-101 DTKNYKQTSV 5.29 N/D 0.75 0 1 / 1
CYSLTR2 Q9NS75 337-346 SVWLRKETRV 5.27 0.26 0.66 0 3 / 3
HPV35-E6 P27228 140-149 SKPTRRETEV 5.22 0.08 0.72 0 4 / 4
NET1 Q7Z628 587-596 SGGKRKETLV 5.21 0.07 0.71 0 4 / 4
HPV33-E6 P06427 140-149 SRSRRRETAL 5.18 0.05 0.58 0 3 / 3
HPV31-E6 P17386 140-149 SRRPRTETQV 5.10 N/D 0.66 0 2 / 2
FRMPD4 Q14CM0 1313-1322 RLPKIKETTV 5.07 0.22 0.57 0 4 / 4
HPV18-E6 P06463 149-158 RLQRRRETQV 5.00 0.40 0.67 0 5 / 5
RASL11B Q9BPW5 239-248 SAKVRTVTSV 5.00 N/D 0.61 0 1 / 1
MARCHF4 Q9P2E8 401-410 RELVMRVTTV 4.93 N/D 0.57 0 1 / 1
MARCHF9 Q86YJ5 337-346 REVVMRVTTV 4.92 N/D 0.56 0 1 / 1
MARCHF3 Q86UD3 244-253 VKRNSKETVV 4.91 N/D 0.56 0 1 / 1
CACNG8 Q8WXS5 416-425 NTLNRKTTPV 4.90 N/D 0.56 0 1 / 1
HPV82-E6 Q9IR59 142-151 PPRQRSETQV 4.90 N/D 0.36 0 2 / 3
CACNG4 Q9UBN1 318-327 SMLNRRTTPV 4.89 N/D 0.55 0 2 / 2
HPV51-E6 P26554 142-151 RTRQRNETQV 4.87 0.12 0.45 0 2 / 2
HPV16-E6 P03126 149-158 SSRTRRETQL 4.87 0.33 0.53 0 9 / 9
ADGRA3 Q8IWK6 1312-1321 TGLWKHETTV 4.86 N/D 0.54 0 1 / 1
CACNG2 Q9Y698 314-323 NTANRRTTPV 4.82 N/D 0.51 0 1 / 1
APC P25054 2834-2843 HSGSYLVTSV 4.79 0.12 0.5 0 2 / 2
GUCY1A2 P33402 723-732 GTMFLRETSL 4.79 N/D 0.5 0 1 / 1
HPV30-E6 P36809 144-153 RHTTSTETAV 4.79 N/D 0.2 0 1 / 2
VANGL1 Q8TAA9 515-524 VLRLQSETSV 4.71 N/D 0.45 0 1 / 1
KCNA7 Q96RP8 447-456 PPGKHLVTEV 4.71 N/D 0.45 0 1 / 1
Showing 1 to 25 of 452 results
Showing 1 to 25 of 452 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.



This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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