Molecule type: protein
Alternative name(s): PSD95
External ID: P78352


Modifications

Variants

Modification: none

This selection has only 1 modification in the database.

Fragments

Fragments

Fragment: 306-403

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)


Showing 1 to 25 of 452 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.

pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
CYSLTR2 Q9NS75 337-346 SVWLRKETRV 5.94 0.41 0.75 0 8 / 8
HPV18-E6 P06463 149-158 RLQRRRETQV 5.50 0.22 0.8 0 10 / 11
CRIPT Q9P021 92-101 DTKNYKQTSV 5.39 N/D 0.67 0 1 / 1
HPV33-E6 P06427 140-149 SRSRRRETAL 5.32 0.07 0.57 0 8 / 8
FRMPD4 Q14CM0 1313-1322 RLPKIKETTV 5.31 0.10 0.61 0 9 / 9
HTLV1-TAX1 P03409 344-353 SEKHFRETEV 5.23 0.11 0.65 0 9 / 9
HPV16-E6 P03126 149-158 SSRTRRETQL 5.15 0.13 0.58 0 17 / 17
HPV35-E6 P27228 140-149 SKPTRRETEV 5.13 0.20 0.62 0 10 / 10
HPV31-E6 P17386 140-149 SRRPRTETQV 5.10 N/D 0.57 0 4 / 4
MARCHF3 Q86UD3 244-253 VKRNSKETVV 4.94 N/D 0.49 0 1 / 1
ADGRA3 Q8IWK6 1312-1321 TGLWKHETTV 4.94 N/D 0.49 0 1 / 1
RASL11B Q9BPW5 239-248 SAKVRTVTSV 4.93 N/D 0.48 0 1 / 1
CACNG8 Q8WXS5 416-425 NTLNRKTTPV 4.89 N/D 0.47 0 1 / 1
NET1 Q7Z628 587-596 SGGKRKETLV 4.88 0.26 0.49 0 10 / 10
MARCHF4 Q9P2E8 401-410 RELVMRVTTV 4.87 N/D 0.46 0 1 / 1
GUCY1A2 P33402 723-732 GTMFLRETSL 4.86 N/D 0.46 0 1 / 1
RALBP1 Q15311 646-655 PSRDRKETSI 4.85 0.34 0.48 0 7 / 7
CACNG4 Q9UBN1 318-327 SMLNRRTTPV 4.85 N/D 0.45 0 2 / 2
HPV51-E6 P26554 142-151 RTRQRNETQV 4.82 0.14 0.35 0 6 / 6
MARCHF9 Q86YJ5 337-346 REVVMRVTTV 4.81 N/D 0.43 0 1 / 1
HBV-Hbc P03146 174-183 RRSQSRESQC 4.72 0.13 0.43 0 3 / 3
CACNG2 Q9Y698 314-323 NTANRRTTPV 4.69 N/D 0.37 0 1 / 1
ATP2B4 P23634 1232-1241 SSLQSLETSV 4.64 0.07 0.32 0 7 / 7
ADGRA1 Q86SQ6 551-560 TGPWKNETTV 4.61 N/D 0.34 0 1 / 1
SCN8A Q9UQD0 1971-1980 RQKEVRESKC 4.60 N/D 0.34 0 1 / 1
Showing 1 to 25 of 452 results
Showing 1 to 25 of 452 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.



This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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