PDLIM1

Molecule type: protein
Alternative name(s): CLIM1 CLP36
External ID: O00151


Modifications

Variants

Modification: none

A specific modification is selected.

See all possible variants
Fragments

Fragments

Fragment: 1-87

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)

Showing 1 to 25 of 452 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
PALLS Q8WX93 1374-1383 — NTALVESEDL 5.47 N/D 0.81 0 1 / 1
MYOZ3 Q8TDC0 242-251 — VRNLPESEEL 5.23 N/D 0.72 0 1 / 1
MYPN Q86TC9 1311-1320 — SRSVVESDEL 5.11 N/D 0.66 0 1 / 1
MYOZ2 Q9NPC6 255-264 — DTTVPESEDL 5.10 N/D 0.66 0 1 / 1
MYOT Q9UBF9 489-498 — QSGLYESEEL 5.09 N/D 0.65 0 1 / 1
ACTN2 P35609 885-894 — SSALYGESDL 4.75 N/D 0.48 0 1 / 1
TJP3 O95049 910-919 — GYDWGPATDL 4.41 N/D 0.3 0 1 / 1
LNX2 Q8N448 681-690 — TVICWPGSLV 4.31 N/D 0.26 0 1 / 1
SLC15A5 A6NIM6 570-579 — SSIDLWETAL 4.26 0.17 0.15 0 3 / 4
GAS2L2 Q8NHY3 871-880 — PLPPEEESWV 4.22 N/D 0.22 0 1 / 1
KCNA5 P22460 604-613 — CLDTSRETDL 4.20 0.09 0.18 0 2 / 2
MYOZ1 Q9NP98 290-299 — IPLDGETEEL 4.18 N/D 0.21 0 1 / 1
CTNNB1 P35222 772-781 — NQLAWFDTDL 4.16 N/D 0.2 0 2 / 2
PKP4 Q99569 1183-1192 — QYPGSPDSWV 4.14 N/D 0.19 0 1 / 1
WWTR1 Q9GZV5 391-400 — NKSEPFLTWL 4.13 N/D 0.19 0 1 / 1
YAP1 P46937 495-504 — LDKESFLTWL 4.10 N/D 0.18 0 1 / 1
CTNND2 Q9UQB3 1216-1225 — HYPASPDSWV 4.06 N/D 0.17 0 1 / 1
RPS6KA1 Q15418 725-735 (TPO)734 RVRKLPSTTL 4.00 N/D 0.2 0 1 / 1
ARHGEF16 Q5VV41 700-709 — MERLRVETDV 4.00 N/D 0.1 0 1 / 2
HTLV1-TAX1 P03409 344-353 — SEKHFRETEV 3.98 0.29 0.12 0 3 / 4
ABCC4 O15439 1316-1325 — STLTIFETAL 3.93 0.09 0.12 0 3 / 4
GRIN2A Q12879 1455-1464 — KKMPSIESDV 3.93 N/D 0.13 0 1 / 1
PBK Q96KB5 313-322 — HIVEALETDV 3.91 N/D 0.08 0 1 / 2
GRASP Q7Z6J2 386-395 — RSLEEEESQL 3.85 N/D 0.06 0 1 / 2
PRKN O60260 456-465 — VCMGDHWFDV 3.83 N/D 0.11 0 1 / 1
Showing 1 to 25 of 452 results
Showing 1 to 25 of 452 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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