SHANK1

Molecule type: protein
External ID: Q9Y566


Modifications

Variants

Modification: none

This selection has only 1 modification in the database.

Fragments

Fragments

Fragment: 655-761

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)

Showing 1 to 25 of 451 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
SLC5A12 Q1EHB4 609-618 — NNMAFETTHF 5.81 N/D 0.9 0 1 / 1
SLC22A11 Q9NSA0 541-550 — EAVTVESTSL 5.68 N/D 0.87 0 1 / 1
SLCO1A2 P46721 661-670 — LKDDELKTKL 5.62 N/D 0.86 0 1 / 1
TRPC5 Q9UL62 964-973 — GQEEQVTTRL 5.61 N/D 0.86 0 1 / 1
SLC15A5 A6NIM6 570-579 — SSIDLWETAL 5.57 0.32 0.68 0 4 / 4
DLGAP4 Q9Y2H0 983-992 — IYVPEAQTRL 5.54 N/D 0.84 0 1 / 1
ARHGAP17 Q68EM7 872-881 — IDNDTESTAL 5.53 N/D 0.83 0 1 / 1
YAP1 P46937 495-504 — LDKESFLTWL 5.40 N/D 0.79 0 1 / 1
SLC34A1 Q06495 630-639 — LPAHHNATRL 5.39 N/D 0.79 0 1 / 1
SLC22A9 Q8IVM8 544-553 — EDPRVEVTQF 5.36 N/D 0.77 0 1 / 1
AKAP10 O43572 653-662 — DQPLEKSTKL 5.33 N/D 0.76 0 1 / 1
WWTR1 Q9GZV5 391-400 — NKSEPFLTWL 5.29 N/D 0.75 0 1 / 1
CACNA1D Q01668 2152-2161 — ADEMICITTL 5.28 N/D 0.74 0 1 / 1
ABCC4 O15439 1316-1325 — STLTIFETAL 5.28 0.12 0.7 0 4 / 4
OTULIN Q96BN8 343-352 — PVRVCEETSL 5.25 0.11 0.73 0 3 / 3
USH1C Q9Y6N9 543-552 — KEYDDELTFF 5.25 N/D 0.73 0 1 / 1
ASIC3 Q9UHC3 522-531 — HRTCYLVTQL 5.24 0.23 0.73 0 3 / 3
GNG4 P50150 66-75 — REKKFFCTIL 5.21 N/D 0.71 0 1 / 1
UNC93A Q86WB7 448-457 — AEDEEIQTKM 5.21 N/D 0.71 0 1 / 1
GRASP Q7Z6J2 386-395 — RSLEEEESQL 5.20 0.09 0.63 0 2 / 2
RPS6KA3 P51812 731-740 — GIKKITSTAL 5.16 N/D 0.69 0 1 / 1
CFTR P13569 1471-1480 — TEEEVQDTRL 5.11 0.04 0.66 0 2 / 2
PTPN18 Q99952 451-460 — RDPPAEWTRV 5.05 N/D 0.63 0 1 / 1
TBC1D10A Q9BXI6 499-508 — TSQESEDTYL 4.99 N/D 0.6 0 1 / 1
SLC22A12 Q96S37 544-553 — GNSVLKSTQF 4.96 N/D 0.59 0 1 / 1
Showing 1 to 25 of 451 results
Showing 1 to 25 of 451 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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