LNX1

Molecule type: protein
Alternative name(s): LNX PDZRN2 UNQ574/PRO1136
External ID: Q8TBB1


Modifications

Variants

Modification: none

A specific modification is selected.

See all possible variants
Fragments

Fragments

Fragment: 261-371

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)

Showing 1 to 25 of 452 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
SDK2 Q58EX2 2163-2172 — APIAGFSSFV 5.16 N/D 0.45 0 1 / 1
GNG4 P50150 66-75 — REKKFFCTIL 5.09 N/D 0.43 0 1 / 1
PLEKHA1 Q9HB21 395-404 — DDASLPVSDV 4.91 N/D 0.36 0 1 / 1
BCR P11274 1262-1271 — RQSILFSTEV 4.85 N/D 0.34 0 1 / 1
TJP3 O95049 910-919 — GYDWGPATDL 4.84 N/D 0.52 0 1 / 1
LNX2 Q8N448 681-690 — TVICWPGSLV 4.79 N/D 0.5 0 1 / 1
TTC24 A2A3L6 573-582 — PMESGICTIV 4.67 N/D 0.28 0 1 / 1
RPS6KA1 Q15418 725-735 (TPO)734 RVRKLPSTTL 4.63 N/D 0.49 0 1 / 1
XKR7 Q5GH72 570-579 — QELLEYETTV 4.57 N/D 0.25 0 1 / 1
PBK Q96KB5 313-322 — HIVEALETDV 4.51 N/D 0.15 0 1 / 2
PLEKHA2 Q9HB19 416-425 — DDENIRTSDV 4.50 N/D 0.23 0 1 / 1
HTR2A P28223 462-471 — DGVNEKVSCV 4.48 N/D 0.22 0 1 / 1
CACNA1D Q01668 2152-2161 — ADEMICITTL 4.48 N/D 0.22 0 1 / 1
EVI5 O60447 801-810 — RRRESYSTTV 4.47 N/D 0.22 0 1 / 1
ADRA1D P25100 563-572 — DYSNLRETDI 4.44 N/D 0.21 0 1 / 1
ADAM22 Q9P0K1 897-906 — QSARLWETSI 4.43 N/D 0.2 0 1 / 1
ABCA1 O95477 2252-2261 — QDEKVKESYV 4.41 0.04 0.25 0 2 / 2
MARCHF9 Q86YJ5 337-346 — REVVMRVTTV 4.41 N/D 0.2 0 1 / 1
PTPRZ1 P23471 2306-2315 — NIAESLESLV 4.36 N/D 0.18 0 1 / 1
APC P25054 2834-2843 — HSGSYLVTSV 4.35 0.11 0.23 0 2 / 2
IQSEC2 Q5JU85 1479-1488 — AKPSRISTVV 4.34 N/D 0.18 0 1 / 1
GRIN2C Q14957 1224-1233 — RRISSLESEV 4.34 N/D 0.18 0 1 / 1
ATRNL1 Q5VV63 1370-1379 — HLSTRQGTCV 4.34 N/D 0.18 0 1 / 1
MCM7 P33993 710-719 — NASRTRITFV 4.30 N/D 0.17 0 1 / 1
RGS12 O14924 1438-1447 — KTSAHHATFV 4.30 0.09 0.2 0 2 / 2
Showing 1 to 25 of 452 results
Showing 1 to 25 of 452 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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