Molecule type: protein
Alternative name(s): PATJ CIPP
External ID: Q8NI35


Modifications

Variants

Modification: none

A specific modification is selected.

See all possible variants
Fragments

Fragments

Fragment: 359-469

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)


Showing 1 to 25 of 452 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.

pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
CNTNAP2 Q9UHC6 1322-1331 IDESKKEWLI 5.46 N/D 0.81 0 1 / 1
TRPV6 Q9H1D0 756-765 EDGESWEYQI 5.33 N/D 0.76 0 1 / 1
JAG1 P78504 1209-1218 QSLNRMEYIV 5.17 N/D 0.69 0 1 / 1
AMOTL1 Q8IY63 947-956 PDGEMMEVLI 5.08 N/D 0.65 0 1 / 1
NECTIN3 Q9NQS3 540-549 SVISRREWYV 5.03 N/D 0.62 0 1 / 1
FAM71C Q8NEG0 232-241 STYCDYTIEI 5.00 N/D 0.61 0 1 / 1
ADAM22 Q9P0K1 897-906 QSARLWETSI 4.92 N/D 0.57 0 1 / 1
PRKN O60260 456-465 VCMGDHWFDV 4.90 N/D 0.56 0 1 / 1
NECTIN1 Q15223 508-517 SFISKKEWYV 4.83 N/D 0.52 0 1 / 1
TGFA P01135 151-160 TACCHSETVV 4.81 N/D 0.51 0 1 / 1
ZNF831 Q5JPB2 1668-1677 DDEDRLVIEI 4.80 N/D 0.5 0 1 / 1
DFNB31 Q9P202 898-907 FLVTEFNVML 4.73 N/D 0.47 0 1 / 1
DGKZ Q13574 919-928 IQREDQETAV 4.72 N/D 0.07 0 1 / 4
PTH1R Q03431 584-593 LLQEEWETVM 4.70 N/D 0.45 0 1 / 1
GNG4 P50150 66-75 REKKFFCTIL 4.67 N/D 0.43 0 1 / 1
BCR P11274 1262-1271 RQSILFSTEV 4.66 N/D 0.42 0 1 / 1
JAM1 Q9Y624 290-299 EFKQTSSFLV 4.65 N/D 0.42 0 1 / 1
TTC24 A2A3L6 573-582 PMESGICTIV 4.65 N/D 0.42 0 1 / 1
XKR7 Q5GH72 570-579 QELLEYETTV 4.63 N/D 0.41 0 1 / 1
PTTG2 Q9NZH5 193-202 LPAVCYDIDI 4.63 N/D 0.41 0 1 / 1
SLC15A5 A6NIM6 570-579 SSIDLWETAL 4.60 0.05 0.25 0 4 / 5
CACNA1D Q01668 2152-2161 ADEMICITTL 4.53 N/D 0.36 0 1 / 1
PRLHR P49683 361-370 GQNMTVSVVI 4.52 N/D 0.35 0 1 / 1
DUSP10 Q9Y6W6 473-482 PKLMGVETVV 4.51 N/D 0.35 0 1 / 1
CIB2 O75838 178-187 DFLSTFHIRI 4.49 N/D 0.34 0 1 / 1
Showing 1 to 25 of 452 results
Showing 1 to 25 of 452 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.



This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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