Molecule type: protein
Alternative name(s): PATJ CIPP
External ID: Q8NI35


Modifications

Variants

Modification: none

A specific modification is selected.

See all possible variants
Fragments

Fragments

Fragment: 1673-1763

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)


Showing 1 to 25 of 452 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.

pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
YAP1 P46937 495-504 LDKESFLTWL 5.45 N/D 0.81 0 1 / 1
WWTR1 Q9GZV5 391-400 NKSEPFLTWL 4.63 N/D 0.41 0 1 / 1
CACNA1D Q01668 2152-2161 ADEMICITTL 4.42 N/D 0.3 0 1 / 1
BCR P11274 1262-1271 RQSILFSTEV 4.32 N/D 0.26 0 1 / 1
GNG4 P50150 66-75 REKKFFCTIL 4.26 N/D 0.24 0 1 / 1
SDK2 Q58EX2 2163-2172 APIAGFSSFV 4.25 N/D 0.23 0 1 / 1
LNX1 Q8TBB1 719-728 TIVSWPGTFL 4.25 N/D 0.23 0 1 / 1
ASIC3 Q9UHC3 522-531 HRTCYLVTQL 4.09 0.25 0.18 0 2 / 3
LNX2 Q8N448 681-690 TVICWPGSLV 4.03 N/D 0.16 0 1 / 1
RGS12 O14924 1438-1447 KTSAHHATFV 4.01 0.09 0.15 0 2 / 2
SLC15A5 A6NIM6 570-579 SSIDLWETAL 3.96 0.17 0.05 0 4 / 5
SORCS3 Q9UPU3 1213-1222 TKEIPNCTSV 3.95 N/D 0.13 0 1 / 1
DACT1 Q9NYF0 827-836 SGSLKLMTTV 3.84 N/D 0.11 0 1 / 1
APC P25054 2834-2843 HSGSYLVTSV 3.81 0.17 0.11 0 2 / 2
EVI5 O60447 801-810 RRRESYSTTV 3.80 N/D 0.1 0 1 / 1
ADAM22 Q9P0K1 897-906 QSARLWETSI 3.80 N/D 0.1 0 1 / 1
SLC23A1 Q9UHI7 589-598 TETASVCTKV 3.78 N/D 0.1 0 1 / 1
PKP4 Q99569 1183-1192 QYPGSPDSWV 3.75 N/D 0.09 0 1 / 1
TTC24 A2A3L6 573-582 PMESGICTIV 3.75 N/D 0.09 0 1 / 1
KCNA7 Q96RP8 447-456 PPGKHLVTEV 3.70 N/D 0.08 0 1 / 1
PDZRN3 Q9UPQ7 1057-1066 YNSFLSVTTV 3.70 N/D 0.08 0 1 / 1
ABCC4 O15439 1316-1325 STLTIFETAL 3.68 0.17 0.08 0 4 / 5
RPS6KA3 P51812 731-740 GIKKITSTAL 3.66 N/D 0.07 0 1 / 1
RPS6KA1 Q15418 725-735 RVRKLPSTTL 3.64 N/D 0.08 0 3 / 4
TMEM215 Q68D42 226-235 QGRWDHETIV 3.64 N/D 0.07 0 1 / 1
Showing 1 to 25 of 452 results
Showing 1 to 25 of 452 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.



This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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