LNX2

Molecule type: protein
Alternative name(s): PDZRN1
External ID: Q8N448


Modifications

Variants

Modification: none

A specific modification is selected.

See all possible variants
Fragments

Fragments

Fragment: 334-426

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)

Showing 1 to 25 of 452 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
MARCHF9 Q86YJ5 337-346 — REVVMRVTTV 5.60 N/D 0.85 0 1 / 1
FCHSD2 O94868 731-740 — KIEDVEITLV 5.60 N/D 0.85 0 1 / 1
TTC24 A2A3L6 573-582 — PMESGICTIV 5.56 N/D 0.84 0 1 / 1
MCM7 P33993 710-719 — NASRTRITFV 5.43 N/D 0.8 0 1 / 1
GJC1 P36383 387-396 — SGDGKTSVWI 5.42 N/D 0.8 0 1 / 1
TRAF7 Q6Q0C0 661-670 — VDSTVKVWTC 5.42 N/D 0.8 0 1 / 1
JAG1 P78504 1209-1218 — QSLNRMEYIV 5.40 N/D 0.79 0 1 / 1
FAM167B Q9BTA0 154-163 — NISARRFTLC 5.39 N/D 0.78 0 1 / 1
CSPG4 Q6UVK1 2313-2322 — PALKNGQYWV 5.28 N/D 0.74 0 1 / 1
MARCHF4 Q9P2E8 401-410 — RELVMRVTTV 5.27 N/D 0.74 0 1 / 1
EXOC4 Q96A65 965-974 — ATKDKKITTV 5.24 N/D 0.73 0 1 / 1
JAM1 Q9Y624 290-299 — EFKQTSSFLV 5.22 N/D 0.72 0 1 / 1
AGMAT Q9BSE5 343-352 — LCALPKVTTV 5.21 N/D 0.65 0 2 / 2
DUSP10 Q9Y6W6 473-482 — PKLMGVETVV 5.21 N/D 0.71 0 1 / 1
TGFA P01135 151-160 — TACCHSETVV 5.21 N/D 0.71 0 1 / 1
EVI5 O60447 801-810 — RRRESYSTTV 5.20 N/D 0.71 0 1 / 1
MARCHF3 Q86UD3 244-253 — VKRNSKETVV 5.20 N/D 0.7 0 1 / 1
TRIM29 Q14134 579-588 — KSGKQTMLVV 5.19 N/D 0.7 0 1 / 1
PTPN18 Q99952 451-460 — RDPPAEWTRV 5.15 N/D 0.68 0 1 / 1
NECTIN3 Q9NQS3 540-549 — SVISRREWYV 5.15 N/D 0.68 0 1 / 1
IGSF5 Q9NSI5 398-407 — PEKVSNTTVV 5.14 N/D 0.68 0 1 / 1
EPHB3 P54753 989-998 — QMNQTLPVQV 5.12 N/D 0.67 0 1 / 1
PRLHR P49683 361-370 — GQNMTVSVVI 5.11 N/D 0.67 0 1 / 1
IQSEC2 Q5JU85 1479-1488 — AKPSRISTVV 5.09 N/D 0.66 0 1 / 1
RNF146 Q9NTX7 350-359 — PDGQCTVTEV 5.08 N/D 0.65 0 1 / 1
Showing 1 to 25 of 452 results
Showing 1 to 25 of 452 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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