LNX2

Molecule type: protein
Alternative name(s): PDZRN1
External ID: Q8N448


Modifications

Variants

Modification: none

A specific modification is selected.

See all possible variants
Fragments

Fragments

Fragment: 223-326

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)

Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
MERS-E K9N5R3 71-82 — KPPLPPDEWV 4.21 N/D 0.24 0 2 / 2
PTEN P60484 393-403 (ALY)402 EDQHTQITKV not detectable N/D 0 0 0 / 1
PTEN P60484 391-403 — EDQHTQITKV not detectable N/D -0.05 0 0 / 1
WNV-NS5 Q9Q6P4 3424-3433 — DTTLVEDTVL not detectable N/D 0.02 0 0 / 5
SARS-Cov2-N P0DTC9 410-419 — SMSSADSTQA not detectable N/D -0.09 0 0 / 2
SARS-CoV2-E P0DTC4 66-75 — NSSRVPDLLV not detectable N/D -0.12 0 0 / 2
SARS-Cov2-3a P0DTC3 266-275 — EPTTTTSVPL not detectable N/D -0.07 0 0 / 2
SARS-Cov-E P59637 67-76 — SSEGVPDLLV not detectable N/D -0.2 0 0 / 2
RPS6KA1 Q15418 725-735 — RVRKLPSTTL not detectable N/D 0.02 0 0 / 4
RPS6KA1 Q15418 725-735 (SEP)732 RVRKLPSTTL not detectable N/D 0.03 0 0 / 3
PTEN P60484 393-403 — EDQHTQITKV not detectable N/D 0.09 0 0 / 1
CBP Q92793 2433-2442 — DTLEKFVEGL not detectable N/D 0.04 0 0 / 1
NET1 Q7Z628 587-596 — SGGKRKETLV not detectable N/D 0.05 0 0 / 1
HTLV1-TAX1 P03409 344-353 — SEKHFRETEV not detectable N/D 0.06 0 0 / 2
HPV35-E6 P27228 140-149 — SKPTRRETEV not detectable N/D 0 0 0 / 1
HPV18-E6 P06463 149-158 — RLQRRRETQV not detectable N/D 0.03 0 0 / 1
HPV16-E6 P03126 149-158 — SSRTRRETQL not detectable N/D -0 0 0 / 7
HPV16-E6 P03126 149-158 (TPO)156 SSRTRRETQL not detectable N/D 0 0 0 / 1
HBV-Hbc P03146 174-183 — RRSQSRESQC not detectable N/D -0.03 0 0 / 2
Showing 1 to 19 of 19 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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