SHROOM2

Molecule type: protein
Alternative name(s): APXL
External ID: Q13796


Modifications

Variants

Modification: none

This selection has only 1 modification in the database.

Fragments

Fragments

Fragment: 22-109

This selection has only 1 possible fragment in the database.

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)

Showing 1 to 25 of 46 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
SLC15A5 A6NIM6 570-579 — SSIDLWETAL 5.76 N/D 0.48 0 1 / 1
SLCO1C1 Q9NYB5 703-712 — NYWPGKETQL 4.98 N/D 0.29 0 1 / 1
ABCC4 O15439 1316-1325 — STLTIFETAL 4.44 N/D 0.2 0 1 / 1
CYSLTR2 Q9NS75 337-346 — SVWLRKETRV 4.35 N/D 0.12 0 1 / 1
KCNA5 P22460 604-613 — CLDTSRETDL 4.22 N/D 0.14 0 1 / 1
WNV-NS5 Q9Q6P4 3424-3433 — DTTLVEDTVL 4.14 N/D 0.19 0 3 / 3
CBP Q92793 2433-2442 — DTLEKFVEGL 3.83 N/D 0.11 0 1 / 1
SARS-Cov2-3a P0DTC3 266-275 — EPTTTTSVPL 3.81 N/D 0.11 0 2 / 2
RPS6KA1 Q15418 725-735 (SEP)732 RVRKLPSTTL 3.71 N/D 0.17 0 3 / 3
RPS6KA1 Q15418 725-735 — RVRKLPSTTL 3.61 N/D 0.11 0 4 / 4
SARS-CoV2-E P0DTC4 66-75 — NSSRVPDLLV not detectable N/D 0.02 0 0 / 2
SARS-Cov-E P59637 67-76 — SSEGVPDLLV not detectable N/D -0.19 0 0 / 2
HPV82-E6 Q9IR59 142-151 — PPRQRSETQV not detectable N/D -0.03 0 0 / 1
SARS-Cov2-N P0DTC9 410-419 — SMSSADSTQA not detectable N/D -0.02 0 0 / 2
RASSF6 Q6ZTQ3 360-369 — KLVIKTETTV not detectable N/D -0.01 0 0 / 1
RALBP1 Q15311 646-655 — PSRDRKETSI not detectable N/D 0.02 0 0 / 1
PTEN P60484 393-403 — EDQHTQITKV not detectable N/D 0.02 0 0 / 1
PTEN P60484 393-403 (ALY)402 EDQHTQITKV not detectable N/D -0.07 0 0 / 1
PBK Q96KB5 313-322 — HIVEALETDV not detectable N/D 0.07 0 0 / 1
NET1 Q7Z628 587-596 — SGGKRKETLV not detectable N/D -0.02 0 0 / 1
MERS-E K9N5R3 71-82 — KPPLPPDEWV not detectable N/D -0.02 0 0 / 2
MAP2K2 P36507 391-400 — QPGTPTRTAV not detectable N/D 0.02 0 0 / 1
KIR3DL3 Q8N743 401-410 — PKTPPTDTSV not detectable N/D 0.01 0 0 / 1
TJP2 Q9UDY2 1181-1190 — QSARYRDTEL not detectable N/D 0 0 0 / 1
PTEN P60484 391-403 — EDQHTQITKV not detectable N/D -0.06 0 0 / 1
Showing 1 to 25 of 46 results
Showing 1 to 25 of 46 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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