Molecule type: protein
Alternative name(s): LNX PDZRN2 UNQ574/PRO1136
External ID: Q8TBB1


Modifications

Variants

Modification: none

A specific modification is selected.

See all possible variants
Fragments

Fragments

Fragment: 631-726

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)


Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.

pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
CBP Q92793 2433-2442 DTLEKFVEGL 4.65 N/D 0.42 0 1 / 1
PTEN P60484 391-403 EDQHTQITKV 4.59 N/D 0.38 0 1 / 1
HPV18-E6 P06463 149-158 RLQRRRETQV 4.03 N/D 0.12 0 1 / 1
HPV35-E6 P27228 140-149 SKPTRRETEV 3.49 N/D 0.11 0 1 / 1
HBV-Hbc P03146 174-183 RRSQSRESQC not detectable N/D -0.07 0 0 / 2
HPV16-E6 P03126 149-158 SSRTRRETQL not detectable N/D -0.04 0 0 / 4
HTLV1-TAX1 P03409 344-353 SEKHFRETEV not detectable N/D -0.02 0 0 / 1
MERS-E K9N5R3 71-82 KPPLPPDEWV not detectable N/D -0.05 0 0 / 2
RPS6KA1 Q15418 725-735 (SEP)732 RVRKLPSTTL not detectable N/D -0.01 0 0 / 2
RPS6KA1 Q15418 725-735 RVRKLPSTTL not detectable N/D -0 0 0 / 1
SARS-Cov-E P59637 67-76 SSEGVPDLLV not detectable N/D -0.04 0 0 / 1
SARS-Cov2-3a P0DTC3 266-275 EPTTTTSVPL not detectable N/D -0.04 0 0 / 2
SARS-CoV2-E P0DTC4 66-75 NSSRVPDLLV not detectable N/D 0.03 0 0 / 1
SARS-Cov2-N P0DTC9 410-419 SMSSADSTQA not detectable N/D -0.04 0 0 / 2
WNV-NS5 Q9Q6P4 3424-3433 DTTLVEDTVL not detectable N/D -0.07 0 0 / 3
Showing 1 to 15 of 15 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.



This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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