Molecule type: protein
Alternative name(s): PATJ CIPP
External ID: Q8NI35


Modifications

Variants

Modification: none

This selection has only 1 modification in the database.

Fragments

Fragments

Fragment: 1058-1167

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)


Showing 1 to 25 of 452 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.

pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
SLC15A5 A6NIM6 570-579 SSIDLWETAL 5.73 0.29 0.71 0 7 / 7
WWTR1 Q9GZV5 391-400 NKSEPFLTWL 5.68 N/D 0.87 0 1 / 1
YAP1 P46937 495-504 LDKESFLTWL 5.66 N/D 0.87 0 1 / 1
GAS2L2 Q8NHY3 871-880 PLPPEEESWV 5.43 N/D 0.8 0 1 / 1
ABCC4 O15439 1316-1325 STLTIFETAL 4.85 0.16 0.47 0 7 / 7
GUCY1A2 P33402 723-732 GTMFLRETSL 4.84 N/D 0.53 0 1 / 1
TJP3 O95049 910-919 GYDWGPATDL 4.80 N/D 0.45 0 1 / 1
FZD7 O75084 565-574 SHSSKGETAV 4.78 N/D 0.12 0 1 / 3
SLCO1C1 Q9NYB5 703-712 NYWPGKETQL 4.63 0.03 0.26 0 6 / 7
CACNA1D Q01668 2152-2161 ADEMICITTL 4.62 N/D 0.4 0 1 / 1
DOCK4 Q8N1I0 1957-1966 RPLPRKVSQL 4.47 N/D 0.11 0 1 / 3
ASIC3 Q9UHC3 522-531 HRTCYLVTQL 4.46 0.19 0.33 0 4 / 4
MCM7 P33993 710-719 NASRTRITFV 4.46 N/D 0.33 0 1 / 1
OTULIN Q96BN8 343-352 PVRVCEETSL 4.42 0.02 0.29 0 3 / 3
CTNND2 Q9UQB3 1216-1225 HYPASPDSWV 4.37 N/D 0.28 0 1 / 1
ARVCF O00192 953-962 AKPQPVDSWV 4.33 N/D 0.24 0 1 / 1
ATP2B1 P20020 1211-1220 SPLHSLETSL 4.32 0.01 0.25 0 3 / 3
BANF1 O75531 80-89 CLREWCDAFL 4.32 N/D 0.26 0 1 / 1
TMEM151B Q8IW70 557-566 RHGSCVETSL 4.31 N/D 0.26 0 1 / 1
ARHGAP6 O43182 965-974 NPDALPETLV 4.30 N/D 0.24 0 2 / 2
PTEN P60484 393-403 (ALY)402 EDQHTQITKV 4.29 0.06 0.26 0 5 / 5
ABCA1 O95477 2252-2261 QDEKVKESYV 4.29 0.00 0.24 0 2 / 2
FCHSD2 O94868 731-740 KIEDVEITLV 4.23 N/D 0.23 0 1 / 1
ASNSD1 Q9NWL6 634-643 NLSIEKETKL 4.22 N/D 0.22 0 1 / 1
CNKSR2 Q8WXI2 1025-1034 HTHSYIETHV 4.22 N/D 0.2 0 1 / 1
Showing 1 to 25 of 452 results
Showing 1 to 25 of 452 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.



This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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