FRMPD2

Molecule type: protein
Alternative name(s): PDZD5C PDZK4 PDZK5C
External ID: Q68DX3


Modifications

Variants

Modification: none

This selection has only 1 modification in the database.

Fragments

Fragments

Fragment: 944-1038

A specific fragment is selected.

See all possible fragments

No statistical (volcano) data available for this fragment.

Showing fragment-specific summary data without graphics instead. (Will be fixed soon.)

Showing 1 to 25 of 452 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
GAS2L2 Q8NHY3 871-880 — PLPPEEESWV 6.16 N/D 0.81 0 1 / 1
ABCA1 O95477 2252-2261 — QDEKVKESYV 5.34 0.02 0.67 0 2 / 2
DGKI O75912 1056-1065 — IGHEDLETAV 5.22 N/D 0.61 0 1 / 1
TRPV3 Q8NET8 781-790 — EVEEFPETSV 5.16 N/D 0.58 0 1 / 1
MCM7 P33993 710-719 — NASRTRITFV 5.11 N/D 0.56 0 1 / 1
RAPGEF2 Q9Y4G8 1490-1499 — EDEDEQVSAV 5.03 N/D 0.57 0 1 / 1
SLC1A7 O00341 551-560 — IQISELETNV 5.03 N/D 0.53 0 1 / 1
ARHGAP6 O43182 965-974 — NPDALPETLV 4.99 N/D 0.55 0 1 / 1
DGKZ Q13574 919-928 — IQREDQETAV 4.98 0.11 0.43 0 4 / 4
PLEKHA1 Q9HB21 395-404 — DDASLPVSDV 4.87 N/D 0.46 0 1 / 1
RAPGEF6 Q8TEU7 1592-1601 — ADENEQVSAV 4.85 N/D 0.48 0 1 / 1
XKR7 Q5GH72 570-579 — QELLEYETTV 4.83 N/D 0.44 0 1 / 1
CNKSR2 Q8WXI2 1025-1034 — HTHSYIETHV 4.83 N/D 0.47 0 1 / 1
PBK Q96KB5 313-322 — HIVEALETDV 4.80 0.14 0.28 0 2 / 2
RGS12 O14924 1438-1447 — KTSAHHATFV 4.77 0.05 0.43 0 2 / 2
FCHSD2 O94868 731-740 — KIEDVEITLV 4.76 N/D 0.41 0 1 / 1
ATP2B4 P23634 1232-1241 — SSLQSLETSV 4.75 0.15 0.36 0 3 / 3
PTPRZ1 P23471 2306-2315 — NIAESLESLV 4.66 N/D 0.36 0 1 / 1
HTR2A P28223 462-471 — DGVNEKVSCV 4.65 N/D 0.36 0 1 / 1
PTEN P60484 393-403 (ALY)402 EDQHTQITKV 4.63 0.05 0.4 0 4 / 4
APC P25054 2834-2843 — HSGSYLVTSV 4.57 0.04 0.34 0 2 / 2
CTNND2 Q9UQB3 1216-1225 — HYPASPDSWV 4.54 N/D 0.31 0 1 / 1
PTPRG P23470 1436-1445 — DPAESMESLV 4.54 N/D 0.31 0 1 / 1
KCNA7 Q96RP8 447-456 — PPGKHLVTEV 4.51 N/D 0.3 0 1 / 1
SLC16A3 O15427 456-465 — EVVHTPETSV 4.50 N/D 0.31 0 1 / 1
Showing 1 to 25 of 452 results
Showing 1 to 25 of 452 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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