H3C1

Molecule type: protein
Alternative name(s): H3C1 H3FA HIST1H3A; H3C2 H3FL HIST1H3B; H3C3 H3FC HIST1H3C; H3C4 H3FB HIST1H3D; H3C6 H3FD HIST1H3E; H3C7 H3FI HIST1H3F; H3C8 H3FH HIST1H3G; H3C10 H3FK HIST1H3H; H3C11 H3FF HIST1H3I; H3C12 H3FJ HIST1H3J
External ID: P68431


Modifications

Variants

Modification: none

This selection has only 1 modification in the database.

Fragments

Fragments

Fragment: 1-136

This selection has only 1 possible fragment in the database.


No binding partner detected
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
SNX27 Q96L92 40-141 — — not detectable N/D -0.06 0.12 0 / 15
SNX27 Q96L92 1-541 — — not detectable N/D 0.37 1.6 0 / 6
OBSCN Q5VST9 5594-5674 — — not detectable N/D 0.29 0.66 0 / 3
ARHGEF7 Q14155 178-251 — — not detectable N/D 0.4 1.89 0 / 3
BIN1 O00499 513-593 — — not detectable N/D 0.19 0.37 0 / 6
PRMT2 P55345 24-96 — — not detectable N/D -0.03 0.05 0 / 3
ABL1 P00519 56-121 — — not detectable N/D -0.39 1.06 0 / 3
AMPH P49418 615-695 — — not detectable N/D 0.33 1.36 0 / 3
TX1BP3 O14907 7-124 — — not detectable N/D -0.39 0.52 0 / 3
SCRIB Q14160 718-814 — — not detectable N/D 0.08 0.17 0 / 3
SCRIB Q14160 858-949 — — not detectable N/D 0.33 1.24 0 / 3
DLG1 Q12959 221-314 — — not detectable N/D 0.01 0.02 0 / 3
DLG1 Q12959 314-412 — — not detectable N/D 0.16 0.56 0 / 3
Showing 1 to 13 of 13 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


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