LAMC1

Molecule type: protein
Alternative name(s): LAMC1 LAMB2
External ID: P11047


Modifications

Variants

Modification: none

This selection has only 1 modification in the database.

Fragments

Fragments

Fragment: 1-1609

This selection has only 1 possible fragment in the database.


Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
DGKI O75912 1056-1065 — IGHEDLETAV 5.58 N/D 0.79 3.25 3 / 3
DGKZ Q13574 919-928 — IQREDQETAV 5.34 N/D 0.69 2.86 3 / 3
DGKK Q5KSL6 1262-1271 — DPLTPSRSQL not detectable N/D -0.2 0.56 0 / 3
DGKH Q86XP1 1211-1220 — LGRSTPQSEV not detectable N/D 0.05 0.1 0 / 3
DGKD Q16760 1205-1214 — LSRSAPAVEA not detectable N/D -0.03 0.07 0 / 3
SNX27 Q96L92 40-141 — — not detectable N/D -0.48 0.63 0 / 6
Showing 1 to 6 of 6 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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