chromosome 1

Molecule type: dna
Uniprot ID:NC_000001.11

Modifications

Variants

This selection has 2 unique variants

non-modified profile
rs10751449/rs10736845 modified profile
Fragments

Fragments

Fragment: 203681644-203681669

A specific fragment is selected.

See all possible fragments


Showing 1 to 25 of 4561 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
TIAL1 Q01085 1-375 — — 7.03 N/D 0.55 2.3 3 / 6
TIA1 P31483 1-386 — — 6.56 N/D 0.49 0.57 3 / 6
HNRNPD Q14103 1-355 — — 6.54 0.45 0.92 17.76 6 / 6
CIRBP Q14011 1-172 — — 6.52 0.46 0.92 15.99 6 / 6
BANF1 O75531 1-89 — — 6.45 0.09 0.93 13.55 6 / 6
THYN1 Q9P016 1-225 — — 6.31 0.12 0.91 19.73 6 / 6
SUB1 P53999 1-127 — — 6.26 0.19 0.9 20.83 6 / 6
LIN28B Q6ZN17 1-250 — — 6.24 0.23 0.89 17.59 6 / 6
LIG3 P49916 1-1009 — — 6.21 0.05 0.89 7.4 6 / 6
RBM3 P98179 1-157 — — 6.20 0.25 0.87 12.29 6 / 6
H1-5 P16401 1-226 — — 6.17 0.34 0.86 15.31 6 / 6
APOBEC3C Q9NRW3 1-190 — — 6.14 0.03 0.87 11.12 6 / 6
H1-10 Q92522 1-213 — — 6.14 0.42 0.84 15.18 6 / 6
HNRNPAB Q99729 1-332 — — 6.12 0.64 0.78 14.31 6 / 6
TFAM Q00059 1-246 — — 6.12 0.01 0.87 17.2 6 / 6
HNRNPDL O14979 1-420 — — 6.11 N/D 0.56 12.41 3 / 6
NIFK Q9BYG3 1-293 — — 6.09 0.15 0.86 10.43 6 / 6
NCL P19338 1-710 — — 6.09 0.27 0.84 24.11 6 / 6
HNRNPA0 Q13151 1-305 — — 6.09 0.33 0.83 11.36 6 / 6
TOP1 P11387 1-765 — — 6.08 0.04 0.86 8.92 6 / 6
HOXB9 P17482 1-250 — — 6.07 0.06 0.85 9.76 6 / 6
FAM98B Q52LJ0 1-433 — — 6.06 0.05 0.85 10.74 6 / 6
CELF2 O95319 1-508 — — 6.02 N/D 0.39 1.37 3 / 6
TRMT6 Q9UJA5 1-497 — — 6.02 0.05 0.84 6.59 6 / 6
GATA1 P15976 1-413 — — 6.00 N/D 0.66 5 3 / 6
Showing 1 to 25 of 4561 results
Showing 1 to 25 of 4561 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


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