chromosome 1

Molecule type: dna
Uniprot ID:NC_000001.11

Modifications

Variants

Modification: rs10751451

A specific modification is selected.

See all possible variants
Fragments

Fragments

Fragment: 203681832-203681862

This selection has only 1 possible fragment in the database.


Showing 1 to 25 of 4561 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
THYN1 Q9P016 1-225 — — 6.77 N/D 0.97 7.53 3 / 3
H1-5 P16401 1-226 — — 6.57 N/D 0.95 8.26 3 / 3
H1-10 Q92522 1-213 — — 6.52 N/D 0.94 11.83 3 / 3
BANF1 O75531 1-89 — — 6.52 N/D 0.94 6.04 3 / 3
DHX36 Q9H2U1 1-1008 — — 6.22 N/D 0.89 4.03 3 / 3
FEN1 P39748 1-380 — — 6.21 N/D 0.89 10.76 3 / 3
MSH3 P20585 1-1137 — — 6.20 N/D 0.89 2.55 3 / 3
TFAM Q00059 1-246 — — 6.20 N/D 0.89 5.81 3 / 3
HMGA1 P17096 1-107 — — 6.19 N/D 0.88 6.64 3 / 3
APOBEC3C Q9NRW3 1-190 — — 6.16 N/D 0.88 7.5 3 / 3
H1-4 P10412 1-219 — — 6.15 N/D 0.88 4.79 3 / 3
LIN28B Q6ZN17 1-250 — — 6.14 N/D 0.87 9.97 3 / 3
APEX1 P27695 1-318 — — 6.12 N/D 0.87 7.74 3 / 3
HOXB9 P17482 1-250 — — 6.12 N/D 0.87 5.38 3 / 3
H1-2 P16403 1-213 — — 6.06 N/D 0.85 5.97 3 / 3
LIG3 P49916 1-1009 — — 6.04 N/D 0.84 6.53 3 / 3
TOP1 P11387 1-765 — — 6.02 N/D 0.84 6.15 3 / 3
CTCF P49711 1-727 — — 5.98 N/D 0.83 6.47 3 / 3
GATA1 P15976 1-413 — — 5.96 N/D 0.82 5.93 3 / 3
NIFK Q9BYG3 1-293 — — 5.95 N/D 0.82 4.15 3 / 3
DIMT1 Q9UNQ2 1-313 — — 5.94 N/D 0.81 8.94 3 / 3
TRMT6 Q9UJA5 1-497 — — 5.93 N/D 0.81 4.46 3 / 3
NCL P19338 1-710 — — 5.91 N/D 0.8 12.39 3 / 3
PARP1 P09874 1-1014 — — 5.91 N/D 0.8 7.61 3 / 3
ZNF787 Q6DD87 1-382 — — 5.91 N/D 0.8 8.86 3 / 3
Showing 1 to 25 of 4561 results
Showing 1 to 25 of 4561 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


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