chromosome 1

Molecule type: dna
Uniprot ID:NC_000001.11

Modifications

Variants

Modification: rs10751449/rs10736845

A specific modification is selected.

See all possible variants
Fragments

Fragments

Fragment: 203681644-203681669

This selection has only 1 possible fragment in the database.


Showing 1 to 25 of 4561 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
H1-10 Q92522 1-213 — — 6.56 N/D 0.95 10.79 3 / 3
BANF1 O75531 1-89 — — 6.55 N/D 0.95 6.78 3 / 3
H1-5 P16401 1-226 — — 6.51 N/D 0.94 9.03 3 / 3
THYN1 Q9P016 1-225 — — 6.42 N/D 0.93 10.84 3 / 3
LIG3 P49916 1-1009 — — 6.26 N/D 0.9 5.88 3 / 3
NIFK Q9BYG3 1-293 — — 6.24 N/D 0.9 7.96 3 / 3
APOBEC3C Q9NRW3 1-190 — — 6.17 N/D 0.88 8.87 3 / 3
TFAM Q00059 1-246 — — 6.11 N/D 0.87 8.6 3 / 3
HNRNPD Q14103 1-355 — — 6.10 N/D 0.86 9.88 3 / 3
MSH3 P20585 1-1137 — — 6.08 N/D 0.86 1.89 3 / 3
SUB1 P53999 1-127 — — 6.07 N/D 0.86 10.42 3 / 3
APEX1 P27695 1-318 — — 6.07 N/D 0.86 7.73 3 / 3
TRMT6 Q9UJA5 1-497 — — 6.07 N/D 0.85 8.04 3 / 3
CIRBP Q14011 1-172 — — 6.06 N/D 0.85 10 3 / 3
CTCF P49711 1-727 — — 6.05 N/D 0.85 6.47 3 / 3
H1-2 P16403 1-213 — — 6.05 N/D 0.85 4.28 3 / 3
TOP1 P11387 1-765 — — 6.04 N/D 0.85 4.94 3 / 3
FEN1 P39748 1-380 — — 6.02 N/D 0.84 10.19 3 / 3
FAM98B Q52LJ0 1-433 — — 6.01 N/D 0.84 5.41 3 / 3
HOXB9 P17482 1-250 — — 6.01 N/D 0.84 4.88 3 / 3
LIN28B Q6ZN17 1-250 — — 6.01 N/D 0.84 8.8 3 / 3
GATA1 P15976 1-413 — — 6.00 N/D 0.83 6.22 3 / 3
SPOUT1 Q5T280 1-376 — — 5.99 N/D 0.83 4.67 3 / 3
ZNF787 Q6DD87 1-382 — — 5.98 N/D 0.83 8.06 3 / 3
H1-4 P10412 1-219 — — 5.98 N/D 0.83 2.65 3 / 3
Showing 1 to 25 of 4561 results
Showing 1 to 25 of 4561 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


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