APOH

Molecule type: protein
Alternative name(s): APOH B2G1
External ID: P02749


Modifications

Variants

Modification: none

A specific modification is selected.

See all possible variants
Fragments

Fragments

Fragment: 1-345

A specific fragment is selected.

See all possible fragments


Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
DGKZ Q13574 919-928 — IQREDQETAV 5.61 N/D 0.8 4.52 3 / 3
SNX27 Q96L92 40-141 — — 5.61 N/D 0.8 9.98 6 / 6
DGKK Q5KSL6 1262-1271 — DPLTPSRSQL 5.28 N/D 0.65 3.21 3 / 3
DGKI O75912 1056-1065 — IGHEDLETAV not detectable N/D 0.67 2.09 0 / 3
DGKH Q86XP1 1211-1220 — LGRSTPQSEV not detectable N/D -0.32 0.03 0 / 3
DGKD Q16760 1205-1214 — LSRSAPAVEA not detectable N/D 0.47 2.84 0 / 3
Showing 1 to 6 of 6 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


This selected protein appears to bind to annotated motifs!
You can use glogo to visualize its the motif preference.

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