chromosome 1

Molecule type: dna
Uniprot ID:NC_000001.11

Modifications

Variants

Modification: none

A specific modification is selected.

See all possible variants
Fragments

Fragments

Fragment: 203681644-203681669

A specific fragment is selected.

See all possible fragments


Showing 1 to 25 of 4561 results
Name Molecule ID Fragment Modification Sequence mean pKd
Average affinity (mean of detectable pKd values)
between these molecules.
pKd = -log10Kd
Zeros (not detectable) are excluded from the mean.
std pKd
Standard deviation of pKd values
Shows the variability in measurements
Average BI
Average BI value
Considering all measurments
-log10P
If more measurements were done, the P values were combined as Pmax^K

Note that this approach is
overly conservative and
penalizing the overall result
if even one test is not
significant in order to
minimize the chance of false positives.
BDR
Binding Detection Ratio
Measured/Total
TIAL1 Q01085 1-375 — — 7.03 N/D 0.98 4.46 3 / 3
HNRNPD Q14103 1-355 — — 6.99 N/D 0.98 9.18 3 / 3
CIRBP Q14011 1-172 — — 6.98 N/D 0.98 8.3 3 / 3
HNRNPAB Q99729 1-332 — — 6.77 N/D 0.97 11.5 3 / 3
PCBP3 P57721 1-371 — — 6.59 N/D 0.95 8.23 3 / 3
PCBP1 Q15365 1-356 — — 6.57 N/D 0.95 8.9 3 / 3
TIA1 P31483 1-386 — — 6.56 N/D 0.95 8.88 3 / 3
PTBP1 P26599 1-557 — — 6.50 N/D 0.94 10.71 3 / 3
PCBP2 Q15366 1-365 — — 6.48 N/D 0.94 8.67 3 / 3
LIN28B Q6ZN17 1-250 — — 6.46 N/D 0.94 10.25 3 / 3
SUB1 P53999 1-127 — — 6.45 N/D 0.93 12.18 3 / 3
RBM3 P98179 1-157 — — 6.44 N/D 0.93 6.45 3 / 3
HNRNPA0 Q13151 1-305 — — 6.42 N/D 0.93 8.09 3 / 3
BANF1 O75531 1-89 — — 6.36 N/D 0.92 7.67 3 / 3
NCL P19338 1-710 — — 6.36 N/D 0.92 14.15 3 / 3
HNRNPA1 P09651 1-372 — — 6.25 N/D 0.9 11.97 3 / 3
THYN1 Q9P016 1-225 — — 6.19 N/D 0.89 10.16 3 / 3
PTER Q96BW5 1-349 — — 6.16 N/D 0.88 11.63 3 / 3
LIG3 P49916 1-1009 — — 6.16 N/D 0.88 4 3 / 3
TFAM Q00059 1-246 — — 6.14 N/D 0.87 9.69 3 / 3
TOP1 P11387 1-765 — — 6.13 N/D 0.87 4.76 3 / 3
HOXB9 P17482 1-250 — — 6.13 N/D 0.87 11.36 3 / 3
APOBEC3C Q9NRW3 1-190 — — 6.12 N/D 0.87 5.86 3 / 3
FAM98B Q52LJ0 1-433 — — 6.11 N/D 0.87 5.67 3 / 3
HNRNPDL O14979 1-420 — — 6.11 N/D 0.87 12.4 3 / 3
Showing 1 to 25 of 4561 results
Showing 1 to 25 of 4561 results

You see a fragment-specific affinity binding profile, where the average affinity is shown based on all measurements done between the same fragments of the same molecules.


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