Details of experiments between Q9Y3R0 and Q15418 Note that the results of all experiments are listed, regardless of the modification states of the fragments.
Experiment series 1 Protein A Protein: GRIP1 Fragment: 996-1086 Site: PDZ_7 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPSTTL
Average holdup BI: 0.11
Normalized holdup BI: 0.11
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.85
Experiment series 2 Protein A Protein: GRIP1 Fragment: 563-659 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPSTTL
Average holdup BI: 0.06
Normalized holdup BI: 0.06
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.52
Experiment series 3 Protein A Protein: GRIP1 Fragment: 145-239 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPSTTL
Average holdup BI: 0.01
Normalized holdup BI: 0.01
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 4 Protein A Protein: GRIP1 Fragment: 145-239 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPSTTL
Average holdup BI: 0.05
Holdup BI standard deviation: 0.12
Immobilized partner concentration (10-6 M): 31
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 3
The affinity was below the detection threshold of the assay.
Experiment series 5 Protein A Protein: GRIP1 Fragment: 145-239 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 726-735 Site: PBM Sequence: RVRKLPSTTL Construct: Biotin-ado-ado-RVRKLPSTTL
Average holdup BI: -0.01
Normalized holdup BI: -0.01
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
Experiment series 6 Protein A Protein: GRIP1 Fragment: 242-344 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPSTTL
Average holdup BI: -0
Normalized holdup BI: -0
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 7 Protein A Protein: GRIP1 Fragment: 242-344 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPSTTL
Average holdup BI: -0.02
Holdup BI standard deviation: 0.08
Immobilized partner concentration (10-6 M): 31
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 4
The affinity was below the detection threshold of the assay.
Experiment series 8 Protein A Protein: GRIP1 Fragment: 242-344 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 726-735 Site: PBM Sequence: RVRKLPSTTL Construct: Biotin-ado-ado-RVRKLPSTTL
Average holdup BI: -0.03
Normalized holdup BI: -0.03
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
Experiment series 9 Protein A Protein: GRIP1 Fragment: 464-567 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPSTTL
Average holdup BI: 0
Normalized holdup BI: 0
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 10 Protein A Protein: GRIP1 Fragment: 464-567 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPSTTL
Average holdup BI: 0.01
Holdup BI standard deviation: 0.04
Immobilized partner concentration (10-6 M): 31
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 4
The affinity was below the detection threshold of the assay.
Experiment series 11 Protein A Protein: GRIP1 Fragment: 464-567 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 726-735 Site: PBM Sequence: RVRKLPSTTL Construct: Biotin-ado-ado-RVRKLPSTTL
Average holdup BI: 0.02
Normalized holdup BI: 0.02
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
Experiment series 12 Protein A Protein: GRIP1 Fragment: 47-137 Site: PDZ_1 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPSTTL
Average holdup BI: -0.05
Immobilized partner concentration (10-6 M): 31
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 13 Protein A Protein: GRIP1 Fragment: 563-659 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPSTTL
Average holdup BI: 0.03
Holdup BI standard deviation: 0.08
Immobilized partner concentration (10-6 M): 31
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 4
The affinity was below the detection threshold of the assay.
Experiment series 14 Protein A Protein: GRIP1 Fragment: 563-659 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 726-735 Site: PBM Sequence: RVRKLPSTTL Construct: Biotin-ado-ado-RVRKLPSTTL
Average holdup BI: -0.02
Normalized holdup BI: -0.02
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
Experiment series 15 Protein A Protein: GRIP1 Fragment: 666-762 Site: PDZ_6 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPSTTL
Average holdup BI: -0.01
Holdup BI standard deviation: 0.02
Immobilized partner concentration (10-6 M): 31
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 4
The affinity was below the detection threshold of the assay.
Experiment series 16 Protein A Protein: GRIP1 Fragment: 996-1086 Site: PDZ_7 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPSTTL
Average holdup BI: 0.04
Holdup BI standard deviation: 0.03
Immobilized partner concentration (10-6 M): 31
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 4
The affinity was below the detection threshold of the assay.
Experiment series 17 Protein A Protein: GRIP1 Fragment: 996-1086 Site: PDZ_7 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 726-735 Site: PBM Sequence: RVRKLPSTTL Construct: Biotin-ado-ado-RVRKLPSTTL
Average holdup BI: 0.01
Normalized holdup BI: 0.01
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
Experiment series 18 Protein A Protein: GRIP1 Fragment: 996-1086 Site: PDZ_7 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (SEP)732 Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPpSTTL
Average holdup BI: 0.07
Normalized holdup BI: 0.07
Immobilized partner concentration (10-6 M): 15
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.68
Experiment series 19 Protein A Protein: GRIP1 Fragment: 996-1086 Site: PDZ_7 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (SEP)732 Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPpSTTL
Average holdup BI: 0.07
Normalized holdup BI: 0.07
Immobilized partner concentration (10-6 M): 15
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.68
Experimental Details not reported internal standards of holdup layout #5
Experiment series 20 Protein A Protein: GRIP1 Fragment: 145-239 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (SEP)732 Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPpSTTL
Average holdup BI: 0.05
Normalized holdup BI: 0.05
Immobilized partner concentration (10-6 M): 15
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.57
Experimental Details not reported internal standards of holdup layout #5
Experiment series 21 Protein A Protein: GRIP1 Fragment: 145-239 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (SEP)732 Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPpSTTL
Average holdup BI: 0.03
Normalized holdup BI: 0.03
Immobilized partner concentration (10-6 M): 15
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 22 Protein A Protein: GRIP1 Fragment: 145-239 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (SEP)732 Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPpSTTL
Average holdup BI: -0
Holdup BI standard deviation: 0.1
Immobilized partner concentration (10-6 M): 40
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 3
The affinity was below the detection threshold of the assay.
Experiment series 23 Protein A Protein: GRIP1 Fragment: 242-344 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (SEP)732 Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPpSTTL
Average holdup BI: -0.02
Normalized holdup BI: -0.02
Immobilized partner concentration (10-6 M): 15
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 24 Protein A Protein: GRIP1 Fragment: 242-344 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (SEP)732 Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPpSTTL
Average holdup BI: 0.05
Normalized holdup BI: 0.05
Immobilized partner concentration (10-6 M): 15
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #5
Experiment series 25 Protein A Protein: GRIP1 Fragment: 242-344 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (SEP)732 Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPpSTTL
Average holdup BI: -0.04
Holdup BI standard deviation: 0.06
Immobilized partner concentration (10-6 M): 40
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 3
The affinity was below the detection threshold of the assay.
Experiment series 26 Protein A Protein: GRIP1 Fragment: 464-567 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (SEP)732 Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPpSTTL
Average holdup BI: -0.02
Normalized holdup BI: -0.02
Immobilized partner concentration (10-6 M): 15
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 27 Protein A Protein: GRIP1 Fragment: 464-567 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (SEP)732 Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPpSTTL
Average holdup BI: 0.05
Normalized holdup BI: 0.05
Immobilized partner concentration (10-6 M): 15
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #5
Experiment series 28 Protein A Protein: GRIP1 Fragment: 464-567 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (SEP)732 Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPpSTTL
Average holdup BI: -0.04
Holdup BI standard deviation: 0.04
Immobilized partner concentration (10-6 M): 40
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 3
The affinity was below the detection threshold of the assay.
Experiment series 29 Protein A Protein: GRIP1 Fragment: 47-137 Site: PDZ_1 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (SEP)732 Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPpSTTL
Average holdup BI: 0.03
Holdup BI standard deviation: 0.06
Immobilized partner concentration (10-6 M): 40
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 30 Protein A Protein: GRIP1 Fragment: 563-659 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (SEP)732 Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPpSTTL
Average holdup BI: -0.03
Normalized holdup BI: -0.03
Immobilized partner concentration (10-6 M): 15
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 31 Protein A Protein: GRIP1 Fragment: 563-659 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (SEP)732 Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPpSTTL
Average holdup BI: 0.02
Normalized holdup BI: 0.02
Immobilized partner concentration (10-6 M): 15
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #5
Experiment series 32 Protein A Protein: GRIP1 Fragment: 563-659 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (SEP)732 Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPpSTTL
Average holdup BI: 0.02
Holdup BI standard deviation: 0.07
Immobilized partner concentration (10-6 M): 40
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 3
The affinity was below the detection threshold of the assay.
Experiment series 33 Protein A Protein: GRIP1 Fragment: 666-762 Site: PDZ_6 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (SEP)732 Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPpSTTL
Average holdup BI: 0.04
Holdup BI standard deviation: 0.05
Immobilized partner concentration (10-6 M): 40
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 3
The affinity was below the detection threshold of the assay.
Experiment series 34 Protein A Protein: GRIP1 Fragment: 996-1086 Site: PDZ_7 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (SEP)732 Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPpSTTL
Average holdup BI: 0.02
Holdup BI standard deviation: 0.02
Immobilized partner concentration (10-6 M): 40
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 3
The affinity was below the detection threshold of the assay.
Experiment series 35 Protein A Protein: GRIP1 Fragment: 996-1086 Site: PDZ_7 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (TPO)733 Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPSpTTL
Average holdup BI: 0.07
Normalized holdup BI: 0.07
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.63
Experiment series 36 Protein A Protein: GRIP1 Fragment: 145-239 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (TPO)733 Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPSpTTL
Average holdup BI: 0.06
Normalized holdup BI: 0.06
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.52
Experiment series 37 Protein A Protein: GRIP1 Fragment: 242-344 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (TPO)733 Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPSpTTL
Average holdup BI: 0
Normalized holdup BI: 0
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 38 Protein A Protein: GRIP1 Fragment: 464-567 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (TPO)733 Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPSpTTL
Average holdup BI: -0.01
Normalized holdup BI: -0.01
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 39 Protein A Protein: GRIP1 Fragment: 563-659 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (TPO)733 Sequence: RVRKLPSTTL Construct: biotin-ttds-RRVRKLPSpTTL
Average holdup BI: 0.04
Normalized holdup BI: 0.04
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 40 Protein A Protein: GRIP1 Fragment: 996-1086 Site: PDZ_7 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (TPO)734 Sequence: RVRKLPSTTL Construct: Biotin-ttds-RRVRKLPSTpTL
Average holdup BI: 0.07
Normalized holdup BI: 0.07
Immobilized partner concentration (10-6 M): 25
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.48
Experiment series 41 Protein A Protein: GRIP1 Fragment: 464-567 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (TPO)734 Sequence: RVRKLPSTTL Construct: Biotin-ttds-RRVRKLPSTpTL
Average holdup BI: 0.05
Normalized holdup BI: 0.05
Immobilized partner concentration (10-6 M): 25
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.36
Experiment series 42 Protein A Protein: GRIP1 Fragment: 242-344 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (TPO)734 Sequence: RVRKLPSTTL Construct: Biotin-ttds-RRVRKLPSTpTL
Average holdup BI: 0.05
Normalized holdup BI: 0.05
Immobilized partner concentration (10-6 M): 25
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.34
Experiment series 43 Protein A Protein: GRIP1 Fragment: 145-239 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (TPO)734 Sequence: RVRKLPSTTL Construct: Biotin-ttds-RRVRKLPSTpTL
Average holdup BI: 0.04
Normalized holdup BI: 0.04
Immobilized partner concentration (10-6 M): 25
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 44 Protein A Protein: GRIP1 Fragment: 563-659 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: RPS6KA1 Fragment: 725-735 Site: PBM Modification: (TPO)734 Sequence: RVRKLPSTTL Construct: Biotin-ttds-RRVRKLPSTpTL
Average holdup BI: 0.04
Normalized holdup BI: 0.04
Immobilized partner concentration (10-6 M): 25
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Please cite ProfAff! (Gogl, G. et al., Nature Communications 2022)
© The ProfAff database is developped by the research team of Gergo Gogl .