Interaction Details


Details of experiments between Q9Y2T3 and Q8TBB1
Note that the results of all experiments are listed, regardless of the modification states of the fragments.


Experiment series 1

Protein A

Protein: GDA
Fragment: 445-454
Site: PBM
Sequence: KQVVPFSSSV
Construct: biotin-ttds-KQVVPFSSSV

Protein B

Protein: LNX1
Fragment: 261-371
Site: PDZ_1
Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.11
Normalized holdup BI: 0.11
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pKd: 3.84
PUBMED ID: 36115835

Experiment series 2

Protein A

Protein: GDA
Fragment: 445-454
Site: PBM
Sequence: KQVVPFSSSV
Construct: biotin-ttds-KQVVPFSSSV

Protein B

Protein: LNX1
Fragment: 500-596
Site: PDZ_3
Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.06
Normalized holdup BI: 0.06
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pKd: 3.55
PUBMED ID: 36115835

Experiment series 3

Protein A

Protein: GDA
Fragment: 445-454
Site: PBM
Sequence: KQVVPFSSSV
Construct: biotin-ttds-KQVVPFSSSV

Protein B

Protein: LNX1
Fragment: 371-470
Site: PDZ_2
Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.04
Normalized holdup BI: 0.05
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
PUBMED ID: 36115835