Details of experiments between  Q9C0E4  and Q9NS75  Note that the results of all experiments are listed, regardless of the modification states of the fragments.
   Experiment series 1 Protein A Protein: GRIP2  Fragment: 137-245  Site: PDZ_2  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: CYSLTR2  Fragment: 337-346  Site: PBM  Sequence: SVWLRKETRV  Construct: biotin-ttds-SVWLRKETRV 
Average holdup BI:  -0.13 
Immobilized partner concentration (10-6 M):  6.7 
Experiment method:  SAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normal layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
    Experiment series 2 Protein A Protein: GRIP2  Fragment: 238-339  Site: PDZ_3  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: CYSLTR2  Fragment: 337-346  Site: PBM  Sequence: SVWLRKETRV  Construct: biotin-ttds-SVWLRKETRV 
Average holdup BI:  -0.15 
Immobilized partner concentration (10-6 M):  6.7 
Experiment method:  SAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normal layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 3 Protein A Protein: GRIP2  Fragment: 238-339  Site: PDZ_3  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: CYSLTR2  Fragment: 337-346  Site: PBM  Sequence: SVWLRKETRV  Construct: Biotin-ado-ado-SVWLRKETRV 
Average holdup BI:  -0.01 
Normalized holdup BI:  -0.01 
Immobilized partner concentration (10-6 M):  18 
Experiment method:  DAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
Experimental Details Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
   Experiment series 4 Protein A Protein: GRIP2  Fragment: 238-339  Site: PDZ_3  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: CYSLTR2  Fragment: 337-346  Site: PBM  Sequence: SVWLRKETRV  Construct: biotin-ttds-SVWLRKETRV 
Average holdup BI:  -0.01 
Holdup BI standard deviation:  0.02 
Normalized holdup BI:  -0.01 
Normalized holdup BI standard deviation:  0.02 
Immobilized partner concentration (10-6 M):  27 
Experiment method:  DAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout 
Number of measurements:  2 
The affinity was below the detection threshold of the assay. 
   Experiment series 5 Protein A Protein: GRIP2  Fragment: 41-133  Site: PDZ_1  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: CYSLTR2  Fragment: 337-346  Site: PBM  Sequence: SVWLRKETRV  Construct: biotin-ttds-SVWLRKETRV 
Average holdup BI:  -0.15 
Immobilized partner concentration (10-6 M):  6.7 
Experiment method:  SAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normal layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 6 Protein A Protein: GRIP2  Fragment: 446-548  Site: PDZ_4  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: CYSLTR2  Fragment: 337-346  Site: PBM  Sequence: SVWLRKETRV  Construct: biotin-ttds-SVWLRKETRV 
Average holdup BI:  -0.11 
Immobilized partner concentration (10-6 M):  6.7 
Experiment method:  SAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normal layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 7 Protein A Protein: GRIP2  Fragment: 446-548  Site: PDZ_4  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: CYSLTR2  Fragment: 337-346  Site: PBM  Sequence: SVWLRKETRV  Construct: Biotin-ado-ado-SVWLRKETRV 
Average holdup BI:  -0 
Normalized holdup BI:  -0 
Immobilized partner concentration (10-6 M):  18 
Experiment method:  DAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
Experimental Details Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
   Experiment series 8 Protein A Protein: GRIP2  Fragment: 446-548  Site: PDZ_4  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: CYSLTR2  Fragment: 337-346  Site: PBM  Sequence: SVWLRKETRV  Construct: biotin-ttds-SVWLRKETRV 
Average holdup BI:  0.03 
Holdup BI standard deviation:  0.03 
Normalized holdup BI:  0.03 
Normalized holdup BI standard deviation:  0.03 
Immobilized partner concentration (10-6 M):  27 
Experiment method:  DAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout 
Number of measurements:  2 
The affinity was below the detection threshold of the assay. 
   Experiment series 9 Protein A Protein: GRIP2  Fragment: 544-642  Site: PDZ_5  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: CYSLTR2  Fragment: 337-346  Site: PBM  Sequence: SVWLRKETRV  Construct: biotin-ttds-SVWLRKETRV 
Average holdup BI:  -0.1 
Immobilized partner concentration (10-6 M):  6.7 
Experiment method:  SAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normal layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 10 Protein A Protein: GRIP2  Fragment: 544-642  Site: PDZ_5  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: CYSLTR2  Fragment: 337-346  Site: PBM  Sequence: SVWLRKETRV  Construct: Biotin-ado-ado-SVWLRKETRV 
Average holdup BI:  -0.02 
Normalized holdup BI:  -0.02 
Immobilized partner concentration (10-6 M):  18 
Experiment method:  DAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
Experimental Details Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
   Experiment series 11 Protein A Protein: GRIP2  Fragment: 544-642  Site: PDZ_5  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: CYSLTR2  Fragment: 337-346  Site: PBM  Sequence: SVWLRKETRV  Construct: biotin-ttds-SVWLRKETRV 
Average holdup BI:  -0.02 
Holdup BI standard deviation:  0.01 
Normalized holdup BI:  -0.02 
Normalized holdup BI standard deviation:  0.01 
Immobilized partner concentration (10-6 M):  27 
Experiment method:  DAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout 
Number of measurements:  2 
The affinity was below the detection threshold of the assay. 
   Experiment series 12 Protein A Protein: GRIP2  Fragment: 649-740  Site: PDZ_6  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: CYSLTR2  Fragment: 337-346  Site: PBM  Sequence: SVWLRKETRV  Construct: biotin-ttds-SVWLRKETRV 
Average holdup BI:  -0.15 
Immobilized partner concentration (10-6 M):  6.7 
Experiment method:  SAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normal layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 13 Protein A Protein: GRIP2  Fragment: 649-740  Site: PDZ_6  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: CYSLTR2  Fragment: 337-346  Site: PBM  Sequence: SVWLRKETRV  Construct: biotin-ttds-SVWLRKETRV 
Average holdup BI:  0.01 
Normalized holdup BI:  0.01 
Immobilized partner concentration (10-6 M):  27 
Experiment method:  DAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 14 Protein A Protein: GRIP2  Fragment: 649-740  Site: PDZ_6  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: CYSLTR2  Fragment: 337-346  Site: PBM  Sequence: SVWLRKETRV  Construct: Biotin-ado-ado-SVWLRKETRV 
Average holdup BI:  0.02 
Normalized holdup BI:  0.02 
Immobilized partner concentration (10-6 M):  18 
Experiment method:  DAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
Experimental Details Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
   Experiment series 15 Protein A Protein: GRIP2  Fragment: 934-1023  Site: PDZ_7  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: CYSLTR2  Fragment: 337-346  Site: PBM  Sequence: SVWLRKETRV  Construct: biotin-ttds-SVWLRKETRV 
Average holdup BI:  -0.09 
Immobilized partner concentration (10-6 M):  6.7 
Experiment method:  SAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normal layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 16 Protein A Protein: GRIP2  Fragment: 934-1023  Site: PDZ_7  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: CYSLTR2  Fragment: 337-346  Site: PBM  Sequence: SVWLRKETRV  Construct: Biotin-ado-ado-SVWLRKETRV 
Average holdup BI:  -0.04 
Normalized holdup BI:  -0.04 
Immobilized partner concentration (10-6 M):  18 
Experiment method:  DAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
Experimental Details Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
   Experiment series 17 Protein A Protein: GRIP2  Fragment: 934-1023  Site: PDZ_7  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: CYSLTR2  Fragment: 337-346  Site: PBM  Sequence: SVWLRKETRV  Construct: biotin-ttds-SVWLRKETRV 
Average holdup BI:  -0.01 
Holdup BI standard deviation:  0.06 
Normalized holdup BI:  -0.01 
Normalized holdup BI standard deviation:  0.06 
Immobilized partner concentration (10-6 M):  27 
Experiment method:  DAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout 
Number of measurements:  2 
The affinity was below the detection threshold of the assay. 
    
 
Please cite ProfAff! (Gogl, G. et al., Nature Communications 2022)  
© The ProfAff database is developped by the research team of Gergo Gogl .