Details of experiments between Q8NI35 and P06463 Note that the results of all experiments are listed, regardless of the modification states of the fragments.
Experiment series 1 Protein A Protein: InaDl Fragment: 673-780 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.19
Normalized holdup BI: 0.19
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 4.13
Experimental Details not reported internal standards of holdup layout #6
Experiment series 2 Protein A Protein: Inadl Fragment: 1425-1530 Site: PDZ_8 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.12
Holdup BI standard deviation: 0.01
Immobilized partner concentration (10-6 M): 13.3
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 2
Measured pK d : 4.01
Experiment series 3 Protein A Protein: InaDl Fragment: 673-780 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.17
Normalized holdup BI: 0.17
Immobilized partner concentration (10-6 M): 43
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.67
Experimental Details not reported internal standards of holdup layout #5
Experiment series 4 Protein A Protein: InaDl Fragment: 1425-1530 Site: PDZ_8 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.06
Normalized holdup BI: 0.06
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.58
Experimental Details not reported internal standards of holdup layout #6
Experiment series 5 Protein A Protein: InaDl Fragment: 1425-1530 Site: PDZ_8 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.11
Normalized holdup BI: 0.12
Immobilized partner concentration (10-6 M): 43
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.52
Experimental Details not reported internal standards of holdup layout #5
Experiment series 6 Protein A Protein: Inadl Fragment: 673-780 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.12
Holdup BI standard deviation: 0.01
Normalized holdup BI: 0.12
Normalized holdup BI standard deviation: 0.01
Immobilized partner concentration (10-6 M): 43
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 2
Measured pK d : 3.52
Experiment series 7 Protein A Protein: Inadl Fragment: 1425-1530 Site: PDZ_8 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.06
Holdup BI standard deviation: 0.03
Normalized holdup BI: 0.08
Normalized holdup BI standard deviation: 0.04
Immobilized partner concentration (10-6 M): 43
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 2
Measured pK d : 3.32
Experiment series 8 Protein A Protein: InaDl Fragment: 1058-1167 Site: PDZ_6 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: -0.03
Normalized holdup BI: -0.03
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #6
Experiment series 9 Protein A Protein: InaDl Fragment: 1058-1167 Site: PDZ_6 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.03
Normalized holdup BI: 0.03
Immobilized partner concentration (10-6 M): 43
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #5
Experiment series 10 Protein A Protein: InaDl Fragment: 113-229 Site: PDZ_1 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0
Normalized holdup BI: 0
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #6
Experiment series 11 Protein A Protein: InaDl Fragment: 113-229 Site: PDZ_1 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.01
Normalized holdup BI: 0.01
Immobilized partner concentration (10-6 M): 43
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #5
Experiment series 12 Protein A Protein: InaDl Fragment: 1530-1615 Site: PDZ_9 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.01
Normalized holdup BI: 0.01
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #6
Experiment series 13 Protein A Protein: InaDl Fragment: 1530-1615 Site: PDZ_9 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.05
Normalized holdup BI: 0.05
Immobilized partner concentration (10-6 M): 43
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #5
Experiment series 14 Protein A Protein: InaDl Fragment: 1673-1763 Site: PDZ_10 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: -0.14
Normalized holdup BI: -0.14
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #6
Experiment series 15 Protein A Protein: InaDl Fragment: 1673-1763 Site: PDZ_10 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.01
Normalized holdup BI: 0.01
Immobilized partner concentration (10-6 M): 43
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #5
Experiment series 16 Protein A Protein: InaDl Fragment: 238-335 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: -0.02
Normalized holdup BI: -0.02
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #6
Experiment series 17 Protein A Protein: InaDl Fragment: 238-335 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: -0.01
Normalized holdup BI: -0.01
Immobilized partner concentration (10-6 M): 43
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #5
Experiment series 18 Protein A Protein: InaDl Fragment: 359-469 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: -0.02
Normalized holdup BI: -0.02
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #6
Experiment series 19 Protein A Protein: InaDl Fragment: 359-469 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.02
Normalized holdup BI: 0.02
Immobilized partner concentration (10-6 M): 43
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #5
Experiment series 20 Protein A Protein: InaDl Fragment: 547-651 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: -0.06
Normalized holdup BI: -0.06
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #6
Experiment series 21 Protein A Protein: InaDl Fragment: 547-651 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.02
Normalized holdup BI: 0.02
Immobilized partner concentration (10-6 M): 43
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #5
Experiment series 22 Protein A Protein: Inadl Fragment: 1058-1167 Site: PDZ_6 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.04
Holdup BI standard deviation: 0.05
Immobilized partner concentration (10-6 M): 13.3
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 23 Protein A Protein: Inadl Fragment: 1058-1167 Site: PDZ_6 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: -0.01
Holdup BI standard deviation: 0.06
Normalized holdup BI: -0.01
Normalized holdup BI standard deviation: 0.07
Immobilized partner concentration (10-6 M): 43
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 4
The affinity was below the detection threshold of the assay.
Experiment series 24 Protein A Protein: Inadl Fragment: 113-229 Site: PDZ_1 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: -0.04
Holdup BI standard deviation: 0.07
Immobilized partner concentration (10-6 M): 13.3
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 25 Protein A Protein: Inadl Fragment: 113-229 Site: PDZ_1 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: -0.02
Holdup BI standard deviation: 0.01
Normalized holdup BI: -0.02
Normalized holdup BI standard deviation: 0.01
Immobilized partner concentration (10-6 M): 43
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 26 Protein A Protein: Inadl Fragment: 1219-1332 Site: PDZ_7 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: -0
Holdup BI standard deviation: 0.1
Immobilized partner concentration (10-6 M): 13.3
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 27 Protein A Protein: Inadl Fragment: 1530-1615 Site: PDZ_9 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.04
Holdup BI standard deviation: 0.03
Normalized holdup BI: 0.04
Normalized holdup BI standard deviation: 0.03
Immobilized partner concentration (10-6 M): 43
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 28 Protein A Protein: Inadl Fragment: 1530-1615 Site: PDZ_9 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.08
Holdup BI standard deviation: 0.03
Immobilized partner concentration (10-6 M): 13.3
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 29 Protein A Protein: Inadl Fragment: 1673-1763 Site: PDZ_10 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.01
Holdup BI standard deviation: 0
Normalized holdup BI: 0.01
Normalized holdup BI standard deviation: 0
Immobilized partner concentration (10-6 M): 43
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 30 Protein A Protein: Inadl Fragment: 1673-1763 Site: PDZ_10 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.02
Holdup BI standard deviation: 0.01
Immobilized partner concentration (10-6 M): 13.3
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 31 Protein A Protein: Inadl Fragment: 238-335 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.01
Holdup BI standard deviation: 0
Normalized holdup BI: 0.01
Normalized holdup BI standard deviation: 0
Immobilized partner concentration (10-6 M): 43
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 32 Protein A Protein: Inadl Fragment: 238-335 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.03
Holdup BI standard deviation: 0
Immobilized partner concentration (10-6 M): 13.3
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 33 Protein A Protein: Inadl Fragment: 359-469 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: -0.05
Holdup BI standard deviation: 0.03
Normalized holdup BI: -0.05
Normalized holdup BI standard deviation: 0.03
Immobilized partner concentration (10-6 M): 43
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 34 Protein A Protein: Inadl Fragment: 359-469 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.02
Holdup BI standard deviation: 0.05
Immobilized partner concentration (10-6 M): 13.3
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 35 Protein A Protein: Inadl Fragment: 547-651 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: -0.01
Holdup BI standard deviation: 0.04
Normalized holdup BI: -0.01
Normalized holdup BI standard deviation: 0.04
Immobilized partner concentration (10-6 M): 43
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 36 Protein A Protein: Inadl Fragment: 547-651 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.06
Holdup BI standard deviation: 0.03
Immobilized partner concentration (10-6 M): 13.3
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 37 Protein A Protein: Inadl Fragment: 673-780 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Sequence: RLQRRRETQV Construct: biotin-ttds-RLQRRRETQV
Average holdup BI: 0.05
Holdup BI standard deviation: 0.02
Immobilized partner concentration (10-6 M): 13.3
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 38 Protein A Protein: Inadl Fragment: 1058-1167 Site: PDZ_6 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Modification: (TPO)156 Sequence: RLQRRRETQV Construct: Biotin-ttds-RLQRRREpTQV
Average holdup BI: -0.03
Normalized holdup BI: -0.03
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 39 Protein A Protein: Inadl Fragment: 113-229 Site: PDZ_1 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Modification: (TPO)156 Sequence: RLQRRRETQV Construct: Biotin-ttds-RLQRRREpTQV
Average holdup BI: -0.03
Normalized holdup BI: -0.03
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 40 Protein A Protein: Inadl Fragment: 1425-1530 Site: PDZ_8 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Modification: (TPO)156 Sequence: RLQRRRETQV Construct: Biotin-ttds-RLQRRREpTQV
Average holdup BI: -0.01
Normalized holdup BI: -0.01
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 41 Protein A Protein: Inadl Fragment: 1530-1615 Site: PDZ_9 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Modification: (TPO)156 Sequence: RLQRRRETQV Construct: Biotin-ttds-RLQRRREpTQV
Average holdup BI: -0
Normalized holdup BI: -0
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 42 Protein A Protein: Inadl Fragment: 1673-1763 Site: PDZ_10 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Modification: (TPO)156 Sequence: RLQRRRETQV Construct: Biotin-ttds-RLQRRREpTQV
Average holdup BI: -0.03
Normalized holdup BI: -0.03
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 43 Protein A Protein: Inadl Fragment: 238-335 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Modification: (TPO)156 Sequence: RLQRRRETQV Construct: Biotin-ttds-RLQRRREpTQV
Average holdup BI: -0.03
Normalized holdup BI: -0.03
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 44 Protein A Protein: Inadl Fragment: 359-469 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Modification: (TPO)156 Sequence: RLQRRRETQV Construct: Biotin-ttds-RLQRRREpTQV
Average holdup BI: -0.01
Normalized holdup BI: -0.01
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 45 Protein A Protein: Inadl Fragment: 547-651 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Modification: (TPO)156 Sequence: RLQRRRETQV Construct: Biotin-ttds-RLQRRREpTQV
Average holdup BI: -0.02
Normalized holdup BI: -0.02
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 46 Protein A Protein: Inadl Fragment: 673-780 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: HPV18-E6 Fragment: 149-158 Site: PBM Modification: (TPO)156 Sequence: RLQRRRETQV Construct: Biotin-ttds-RLQRRREpTQV
Average holdup BI: 0.01
Normalized holdup BI: 0.01
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Please cite ProfAff! (Gogl, G. et al., Nature Communications 2022)
© The ProfAff database is developped by the research team of Gergo Gogl .