Interaction Details


Details of experiments between Q86UL8 and Q8WXI2
Note that the results of all experiments are listed, regardless of the modification states of the fragments.


Experiment series 1

Protein A

Protein: MAGI2
Fragment: 915-1017
Site: PDZ_5
Construct: his6-MBP-TEVsite-PDZ

Protein B

Protein: CNKSR2
Fragment: 1025-1034
Site: PBM
Sequence: HTHSYIETHV
Construct: Biotin-Ahx-HTHSYIETHV
Average holdup BI: 0.52
Normalized holdup BI: 0.52
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pKd: 4.83
PUBMED ID: 36115835

Experiment series 2

Protein A

Protein: MAGI2
Fragment: 1141-1229
Site: PDZ_6
Construct: his6-MBP-TEVsite-PDZ

Protein B

Protein: CNKSR2
Fragment: 1025-1034
Site: PBM
Sequence: HTHSYIETHV
Construct: Biotin-Ahx-HTHSYIETHV
Average holdup BI: 0.28
Normalized holdup BI: 0.3
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pKd: 4.41
PUBMED ID: 36115835

Experiment series 3

Protein A

Protein: MAGI2
Fragment: 410-522
Site: PDZ_2
Construct: his6-MBP-TEVsite-PDZ

Protein B

Protein: CNKSR2
Fragment: 1025-1034
Site: PBM
Sequence: HTHSYIETHV
Construct: Biotin-Ahx-HTHSYIETHV
Average holdup BI: 0.24
Holdup BI standard deviation: 0
Normalized holdup BI: 0.28
Normalized holdup BI standard deviation: 0
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 2
Measured pKd: 4.37
PUBMED ID: 36115835

Experiment series 4

Protein A

Protein: MAGI2
Fragment: 600-682
Site: PDZ_3
Construct: his6-MBP-TEVsite-PDZ

Protein B

Protein: CNKSR2
Fragment: 1025-1034
Site: PBM
Sequence: HTHSYIETHV
Construct: Biotin-Ahx-HTHSYIETHV
Average holdup BI: 0.14
Normalized holdup BI: 0.14
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pKd: 3.98
PUBMED ID: 36115835

Experiment series 5

Protein A

Protein: MAGI2
Fragment: 772-865
Site: PDZ_4
Construct: his6-MBP-TEVsite-PDZ

Protein B

Protein: CNKSR2
Fragment: 1025-1034
Site: PBM
Sequence: HTHSYIETHV
Construct: Biotin-Ahx-HTHSYIETHV
Average holdup BI: 0.04
Normalized holdup BI: 0.05
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
PUBMED ID: 36115835