Interaction Details


Details of experiments between Q13884 and Q9UBN1
Note that the results of all experiments are listed, regardless of the modification states of the fragments.


Experiment series 1

Protein A

Protein: SNTB1
Fragment: 107-196
Site: PDZ
Construct: his6-MBP-TEVsite-PDZ

Protein B

Protein: CACNG4
Fragment: 318-327
Site: PBM
Sequence: SMLNRRTTPV
Construct: biotin-ado-ado-SMLNRRTTPV
Average holdup BI: 0.15
Holdup BI standard deviation: 0.04
Normalized holdup BI: 0.17
Normalized holdup BI standard deviation: 0.04
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 2
Measured pKd: 4.07
PUBMED ID: 36115835
Experimental Details

Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality causing a systematic error in reported affinities.