Details of experiments between P60484 and Q8NI35 Note that the results of all experiments are listed, regardless of the modification states of the fragments.
Experiment series 1 Protein A Protein: PTEN Fragment: 394-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ado-ado-EDQHTQITKV
Protein B Protein: InaDl Fragment: 1425-1530 Site: PDZ_8 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.31
Normalized holdup BI: 0.33
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 4.47
Experimental Details Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
Experiment series 2 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Protein B Protein: Inadl Fragment: 1425-1530 Site: PDZ_8 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.25
Normalized holdup BI: 0.34
Immobilized partner concentration (10-6 M): 19
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 4.46
Experiment series 3 Protein A Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Protein B Protein: InaDl Fragment: 1425-1530 Site: PDZ_8 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.25
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
Measured pK d : 4.31
Experiment series 4 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Protein B Protein: Inadl Fragment: 1425-1530 Site: PDZ_8 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.39
Immobilized partner concentration (10-6 M): 36
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
Measured pK d : 4.26
Experiment series 5 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Protein B Protein: Inadl Fragment: 1058-1167 Site: PDZ_6 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.1
Holdup BI standard deviation: 0.01
Normalized holdup BI: 0.11
Normalized holdup BI standard deviation: 0.01
Immobilized partner concentration (10-6 M): 19
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 2
Measured pK d : 3.82
Experiment series 6 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Protein B Protein: Inadl Fragment: 113-229 Site: PDZ_1 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.1
Normalized holdup BI: 0.1
Immobilized partner concentration (10-6 M): 19
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.77
Experiment series 7 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Protein B Protein: Inadl Fragment: 1219-1332 Site: PDZ_7 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.14
Immobilized partner concentration (10-6 M): 36
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
Measured pK d : 3.65
Experiment series 8 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Protein B Protein: Inadl Fragment: 1673-1763 Site: PDZ_10 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.07
Normalized holdup BI: 0.07
Immobilized partner concentration (10-6 M): 19
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.58
Experiment series 9 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Protein B Protein: Inadl Fragment: 359-469 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.05
Normalized holdup BI: 0.05
Immobilized partner concentration (10-6 M): 19
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.45
Experiment series 10 Protein A Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Protein B Protein: InaDl Fragment: 1058-1167 Site: PDZ_6 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.04
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 11 Protein A Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Protein B Protein: InaDl Fragment: 113-229 Site: PDZ_1 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.09
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 12 Protein A Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Protein B Protein: InaDl Fragment: 1219-1332 Site: PDZ_7 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.07
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 13 Protein A Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Protein B Protein: InaDl Fragment: 1530-1615 Site: PDZ_9 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.06
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 14 Protein A Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Protein B Protein: InaDl Fragment: 1673-1763 Site: PDZ_10 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.05
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 15 Protein A Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Protein B Protein: InaDl Fragment: 238-335 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.04
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 16 Protein A Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Protein B Protein: InaDl Fragment: 359-469 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.03
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 17 Protein A Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Protein B Protein: InaDl Fragment: 547-651 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.08
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 18 Protein A Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Protein B Protein: InaDl Fragment: 673-780 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.04
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 19 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Protein B Protein: Inadl Fragment: 1058-1167 Site: PDZ_6 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.08
Immobilized partner concentration (10-6 M): 36
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 20 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Protein B Protein: Inadl Fragment: 113-229 Site: PDZ_1 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.02
Immobilized partner concentration (10-6 M): 36
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 21 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Protein B Protein: Inadl Fragment: 1530-1615 Site: PDZ_9 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.01
Immobilized partner concentration (10-6 M): 36
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 22 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Protein B Protein: Inadl Fragment: 1530-1615 Site: PDZ_9 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.04
Normalized holdup BI: 0.04
Immobilized partner concentration (10-6 M): 19
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 23 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Protein B Protein: Inadl Fragment: 1673-1763 Site: PDZ_10 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.02
Immobilized partner concentration (10-6 M): 36
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 24 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Protein B Protein: Inadl Fragment: 238-335 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.01
Immobilized partner concentration (10-6 M): 36
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 25 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Protein B Protein: Inadl Fragment: 238-335 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.04
Normalized holdup BI: 0.04
Immobilized partner concentration (10-6 M): 19
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 26 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Protein B Protein: Inadl Fragment: 359-469 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0
Immobilized partner concentration (10-6 M): 36
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 27 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Protein B Protein: Inadl Fragment: 547-651 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.05
Immobilized partner concentration (10-6 M): 36
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 28 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Protein B Protein: Inadl Fragment: 547-651 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.04
Normalized holdup BI: 0.04
Immobilized partner concentration (10-6 M): 19
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 29 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Protein B Protein: Inadl Fragment: 673-780 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.04
Immobilized partner concentration (10-6 M): 36
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 30 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Protein B Protein: Inadl Fragment: 673-780 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.05
Normalized holdup BI: 0.05
Immobilized partner concentration (10-6 M): 19
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 31 Protein A Protein: PTEN Fragment: 394-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ado-ado-EDQHTQITKV
Protein B Protein: InaDl Fragment: 1058-1167 Site: PDZ_6 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.05
Normalized holdup BI: 0.05
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
Experiment series 32 Protein A Protein: PTEN Fragment: 394-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ado-ado-EDQHTQITKV
Protein B Protein: InaDl Fragment: 113-229 Site: PDZ_1 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.01
Normalized holdup BI: -0.01
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
Experiment series 33 Protein A Protein: PTEN Fragment: 394-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ado-ado-EDQHTQITKV
Protein B Protein: InaDl Fragment: 1530-1615 Site: PDZ_9 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.01
Normalized holdup BI: 0.01
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
Experiment series 34 Protein A Protein: PTEN Fragment: 394-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ado-ado-EDQHTQITKV
Protein B Protein: InaDl Fragment: 1673-1763 Site: PDZ_10 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0
Normalized holdup BI: -0
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
Experiment series 35 Protein A Protein: PTEN Fragment: 394-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ado-ado-EDQHTQITKV
Protein B Protein: InaDl Fragment: 238-335 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.01
Normalized holdup BI: -0.01
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
Experiment series 36 Protein A Protein: PTEN Fragment: 394-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ado-ado-EDQHTQITKV
Protein B Protein: InaDl Fragment: 359-469 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0
Normalized holdup BI: 0
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
Experiment series 37 Protein A Protein: PTEN Fragment: 394-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ado-ado-EDQHTQITKV
Protein B Protein: InaDl Fragment: 547-651 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.03
Normalized holdup BI: -0.03
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
Experiment series 38 Protein A Protein: PTEN Fragment: 394-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ado-ado-EDQHTQITKV
Protein B Protein: InaDl Fragment: 673-780 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.02
Normalized holdup BI: 0.02
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
Experiment series 39 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: Inadl Fragment: 1425-1530 Site: PDZ_8 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.37
Normalized holdup BI: 0.5
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 4.82
Experiment series 40 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: InaDl Fragment: 1425-1530 Site: PDZ_8 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.37
Normalized holdup BI: 0.4
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 4.64
Experimental Details not reported internal standards of holdup layout #5
Experiment series 41 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: InaDl Fragment: 1425-1530 Site: PDZ_8 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.38
Normalized holdup BI: 0.4
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 4.61
Experimental Details not reported internal standards of holdup layout #6
Experiment series 42 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: Inadl Fragment: 1425-1530 Site: PDZ_8 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.51
Immobilized partner concentration (10-6 M): 29
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
Measured pK d : 4.58
Experiment series 43 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: Inadl Fragment: 1058-1167 Site: PDZ_6 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.24
Holdup BI standard deviation: 0
Normalized holdup BI: 0.27
Normalized holdup BI standard deviation: 0
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 2
Measured pK d : 4.37
Experiment series 44 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: InaDl Fragment: 1058-1167 Site: PDZ_6 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.23
Normalized holdup BI: 0.25
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 4.33
Experimental Details not reported internal standards of holdup layout #5
Experiment series 45 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: InaDl Fragment: 1058-1167 Site: PDZ_6 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.24
Normalized holdup BI: 0.24
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 4.26
Experimental Details not reported internal standards of holdup layout #6
Experiment series 46 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: Inadl Fragment: 1058-1167 Site: PDZ_6 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.32
Immobilized partner concentration (10-6 M): 29
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
Measured pK d : 4.22
Experiment series 47 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: Inadl Fragment: 1219-1332 Site: PDZ_7 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.31
Immobilized partner concentration (10-6 M): 29
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
Measured pK d : 4.2
Experiment series 48 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: Inadl Fragment: 113-229 Site: PDZ_1 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.1
Normalized holdup BI: 0.1
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.85
Experiment series 49 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: InaDl Fragment: 359-469 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.09
Normalized holdup BI: 0.1
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.84
Experimental Details not reported internal standards of holdup layout #5
Experiment series 50 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: InaDl Fragment: 238-335 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.08
Normalized holdup BI: 0.08
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.73
Experimental Details not reported internal standards of holdup layout #5
Experiment series 51 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: Inadl Fragment: 1530-1615 Site: PDZ_9 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.07
Normalized holdup BI: 0.07
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.67
Experiment series 52 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: InaDl Fragment: 238-335 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.07
Normalized holdup BI: 0.07
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.62
Experimental Details not reported internal standards of holdup layout #6
Experiment series 53 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: InaDl Fragment: 1530-1615 Site: PDZ_9 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.07
Normalized holdup BI: 0.07
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.62
Experimental Details not reported internal standards of holdup layout #5
Experiment series 54 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: InaDl Fragment: 113-229 Site: PDZ_1 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.06
Normalized holdup BI: 0.06
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.62
Experimental Details not reported internal standards of holdup layout #5
Experiment series 55 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: Inadl Fragment: 238-335 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.06
Normalized holdup BI: 0.06
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.6
Experiment series 56 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: InaDl Fragment: 1673-1763 Site: PDZ_10 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.06
Normalized holdup BI: 0.06
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.57
Experimental Details not reported internal standards of holdup layout #5
Experiment series 57 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: InaDl Fragment: 113-229 Site: PDZ_1 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.02
Normalized holdup BI: 0.02
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #6
Experiment series 58 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: InaDl Fragment: 1530-1615 Site: PDZ_9 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.03
Normalized holdup BI: 0.03
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #6
Experiment series 59 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: InaDl Fragment: 1673-1763 Site: PDZ_10 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.01
Normalized holdup BI: -0.01
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #6
Experiment series 60 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: InaDl Fragment: 359-469 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.03
Normalized holdup BI: 0.03
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #6
Experiment series 61 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: InaDl Fragment: 547-651 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.05
Normalized holdup BI: -0.05
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #6
Experiment series 62 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: InaDl Fragment: 547-651 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0
Normalized holdup BI: -0
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #5
Experiment series 63 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: InaDl Fragment: 673-780 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.01
Normalized holdup BI: -0.01
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #6
Experiment series 64 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: InaDl Fragment: 673-780 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.01
Normalized holdup BI: 0.01
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #5
Experiment series 65 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: Inadl Fragment: 113-229 Site: PDZ_1 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0
Immobilized partner concentration (10-6 M): 29
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 66 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: Inadl Fragment: 1530-1615 Site: PDZ_9 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.07
Immobilized partner concentration (10-6 M): 29
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 67 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: Inadl Fragment: 1673-1763 Site: PDZ_10 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0
Normalized holdup BI: -0
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 68 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: Inadl Fragment: 359-469 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.02
Immobilized partner concentration (10-6 M): 29
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 69 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: Inadl Fragment: 359-469 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.04
Normalized holdup BI: 0.04
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 70 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: Inadl Fragment: 547-651 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.11
Immobilized partner concentration (10-6 M): 29
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 71 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: Inadl Fragment: 547-651 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.07
Normalized holdup BI: -0.07
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 72 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: Inadl Fragment: 673-780 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.08
Immobilized partner concentration (10-6 M): 29
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 73 Protein A Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Protein B Protein: Inadl Fragment: 673-780 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.01
Normalized holdup BI: 0.01
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Please cite ProfAff! (Gogl, G. et al., Nature Communications 2022)
© The ProfAff database is developped by the research team of Gergo Gogl .