Interaction Details


Details of experiments between P57105 and Q8N448
Note that the results of all experiments are listed, regardless of the modification states of the fragments.


Experiment series 1

Protein A

Protein: SYNJ2BP
Fragment: 6-103
Site: PDZ
Construct: his6-MBP-TEVsite-PDZ

Protein B

Protein: LNX2
Fragment: 681-690
Site: PBM
Sequence: TVICWPGSLV
Construct: Biotin-Ahx-TVICWPGSLV
Average holdup BI: 0.69
Holdup BI standard deviation: 0.02
Normalized holdup BI: 0.83
Normalized holdup BI standard deviation: 0.03
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 2
Measured pKd: 5.53
PUBMED ID: 36115835
Experimental Details

The peptide stock solution had solubility issues. The peptide concentration in the affinity conversion step may differ from reality causing a systematic error in reported affinities.