Interaction Details

Details of experiments between P38159 and O00499
Note that the results of all experiments are listed, regardless of the modification states of the fragments.

Experiment series 1

Protein A

Protein: RBMX
Fragment: 1-391
Construct: endogenous protein (Jurkat)

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Construct: avi(biotin)-his6-MBP-TEVsite-SH3

Average holdup BI: 0.37

Immobilized partner concentration (10^-6M): 10

P value: 5.58

Experiment method: nHU_Jurkat

Details of affinity fitting: hyperbolic binding equation

Date of measurement: 2022-06-29

Number of measurements: 3

Measured pK_d: 4.77

PUBMED ID: 38995680

Experimental Details

-log10(P Two-sided unpaired T-test (6 vs 3))

Experiment series 2

Protein A

Protein: RBMX
Fragment: 90-104
Site: PxxP_2
Sequence: ESGRRGPPPPPRSRG
Construct: Bio Ado Ado-ESGRRGPPPPPRSRG-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: 0.44

Holdup BI standard deviation: 0.01

Immobilized partner concentration (10^-6M): 18

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-16

Number of measurements: 2

Measured pK_d: 4.69

PUBMED ID: 38995680

Experiment series 3

Protein A

Protein: RBMX
Fragment: 91-105
Site: PxxP_3
Sequence: SGRRGPPPPPRSRGP
Construct: Bio Ado Ado-SGRRGPPPPPRSRGP-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: 0.42

Immobilized partner concentration (10^-6M): 18

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-16

Number of measurements: 1

Measured pK_d: 4.65

PUBMED ID: 38995680

Experiment series 4

Protein A

Protein: RBMX
Fragment: 1-391
Construct: endogenous protein (Jurkat)

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Construct: avi(biotin)-his6-MBP-TEVsite-SH3

Average holdup BI: 0.19

Immobilized partner concentration (10^-6M): 10

P value: 4.1

Experiment method: nHU_Jurkat

Details of affinity fitting: hyperbolic binding equation

Date of measurement: 2022-06-29

Number of measurements: 3

The affinity was below the detection threshold of the assay.

PUBMED ID: 38995680

Experimental Details

-log10(P Two-sided unpaired T-test (6 vs 3))

Experiment series 5

Protein A

Protein: RBMX
Fragment: 161-175
Site: PxxP_1
Sequence: PPKRSAPSGPVRSSS
Construct: Bio Ado Ado-PPKRSAPSGPVRSSS-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: -0.03

Holdup BI standard deviation: 0.01

Immobilized partner concentration (10^-6M): 18

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-16

Number of measurements: 2

The affinity was below the detection threshold of the assay.

PUBMED ID: 38995680

Experiment series 6

Protein A

Protein: RBMX
Fragment: 90-104
Site: PxxP_2
Sequence: ESGRRGPPPPPRSRG
Construct: Bio Ado Ado-ESGRRGPPPPPRSRG-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: D537V
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: 0.05

Holdup BI standard deviation: 0.01

Immobilized partner concentration (10^-6M): 18

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-17

Number of measurements: 2

Measured pK_d: 3.49

PUBMED ID: 38995680

Experiment series 7

Protein A

Protein: RBMX
Fragment: 161-175
Site: PxxP_1
Sequence: PPKRSAPSGPVRSSS
Construct: Bio Ado Ado-PPKRSAPSGPVRSSS-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: D537V
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: -0.02

Holdup BI standard deviation: 0.01

Immobilized partner concentration (10^-6M): 18

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-17

Number of measurements: 2

The affinity was below the detection threshold of the assay.

PUBMED ID: 38995680

Experiment series 8

Protein A

Protein: RBMX
Fragment: 91-105
Site: PxxP_3
Sequence: SGRRGPPPPPRSRGP
Construct: Bio Ado Ado-SGRRGPPPPPRSRGP-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: D537V
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: 0.05

Immobilized partner concentration (10^-6M): 18

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-17

Number of measurements: 1

The affinity was below the detection threshold of the assay.

PUBMED ID: 38995680

Experiment series 9

Protein A

Protein: RBMX
Fragment: 161-175
Site: PxxP_1
Sequence: PPKRSAPSGPVRSSS
Construct: Bio Ado Ado-PPKRSAPSGPVRSSS-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: F584S
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: -0.03

Holdup BI standard deviation: 0.03

Immobilized partner concentration (10^-6M): 18

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-17

Number of measurements: 2

The affinity was below the detection threshold of the assay.

PUBMED ID: 38995680

Experiment series 10

Protein A

Protein: RBMX
Fragment: 90-104
Site: PxxP_2
Sequence: ESGRRGPPPPPRSRG
Construct: Bio Ado Ado-ESGRRGPPPPPRSRG-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: F584S
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: -0.01

Holdup BI standard deviation: 0.01

Immobilized partner concentration (10^-6M): 18

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-17

Number of measurements: 2

The affinity was below the detection threshold of the assay.

PUBMED ID: 38995680

Experiment series 11

Protein A

Protein: RBMX
Fragment: 91-105
Site: PxxP_3
Sequence: SGRRGPPPPPRSRGP
Construct: Bio Ado Ado-SGRRGPPPPPRSRGP-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: F584S
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: -0.02

Immobilized partner concentration (10^-6M): 18

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-17

Number of measurements: 1

The affinity was below the detection threshold of the assay.

PUBMED ID: 38995680

Experiment series 12

Protein A

Protein: RBMX
Fragment: 90-104
Site: PxxP_2
Sequence: ESGRRGPPPPPRSRG
Construct: Bio Ado Ado-ESGRRGPPPPPRSRG-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: P551L
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: 0.23

Holdup BI standard deviation: 0.01

Immobilized partner concentration (10^-6M): 8

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-17

Number of measurements: 2

Measured pK_d: 4.61

PUBMED ID: 38995680

Experiment series 13

Protein A

Protein: RBMX
Fragment: 91-105
Site: PxxP_3
Sequence: SGRRGPPPPPRSRGP
Construct: Bio Ado Ado-SGRRGPPPPPRSRGP-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: P551L
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: 0.22

Immobilized partner concentration (10^-6M): 8

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-17

Number of measurements: 1

Measured pK_d: 4.57

PUBMED ID: 38995680

Experiment series 14

Protein A

Protein: RBMX
Fragment: 161-175
Site: PxxP_1
Sequence: PPKRSAPSGPVRSSS
Construct: Bio Ado Ado-PPKRSAPSGPVRSSS-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: P551L
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: -0.02

Holdup BI standard deviation: 0.03

Immobilized partner concentration (10^-6M): 8

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-17

Number of measurements: 2

The affinity was below the detection threshold of the assay.

PUBMED ID: 38995680

Experiment series 15

Protein A

Protein: RBMX
Fragment: 90-104
Site: PxxP_2
Sequence: ESGRRGPPPPPRSRG
Construct: Bio Ado Ado-ESGRRGPPPPPRSRG-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: Q540H
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: 0.46

Holdup BI standard deviation: 0.08

Immobilized partner concentration (10^-6M): 18

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-17

Number of measurements: 2

Measured pK_d: 4.71

PUBMED ID: 38995680

Experiment series 16

Protein A

Protein: RBMX
Fragment: 91-105
Site: PxxP_3
Sequence: SGRRGPPPPPRSRGP
Construct: Bio Ado Ado-SGRRGPPPPPRSRGP-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: Q540H
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: 0.42

Immobilized partner concentration (10^-6M): 18

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-17

Number of measurements: 1

Measured pK_d: 4.64

PUBMED ID: 38995680

Experiment series 17

Protein A

Protein: RBMX
Fragment: 161-175
Site: PxxP_1
Sequence: PPKRSAPSGPVRSSS
Construct: Bio Ado Ado-PPKRSAPSGPVRSSS-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: Q540H
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: -0.03

Holdup BI standard deviation: 0.01

Immobilized partner concentration (10^-6M): 18

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-17

Number of measurements: 2

The affinity was below the detection threshold of the assay.

PUBMED ID: 38995680

Experiment series 18

Protein A

Protein: RBMX
Fragment: 90-104
Site: PxxP_2
Sequence: ESGRRGPPPPPRSRG
Construct: Bio Ado Ado-ESGRRGPPPPPRSRG-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: R581C
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: 0.26

Holdup BI standard deviation: 0.02

Immobilized partner concentration (10^-6M): 10

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-18

Number of measurements: 2

Measured pK_d: 4.59

PUBMED ID: 38995680

Experiment series 19

Protein A

Protein: RBMX
Fragment: 91-105
Site: PxxP_3
Sequence: SGRRGPPPPPRSRGP
Construct: Bio Ado Ado-SGRRGPPPPPRSRGP-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: R581C
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: 0.23

Immobilized partner concentration (10^-6M): 10

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-18

Number of measurements: 1

Measured pK_d: 4.52

PUBMED ID: 38995680

Experiment series 20

Protein A

Protein: RBMX
Fragment: 161-175
Site: PxxP_1
Sequence: PPKRSAPSGPVRSSS
Construct: Bio Ado Ado-PPKRSAPSGPVRSSS-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: R581C
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: -0.03

Holdup BI standard deviation: 0.01

Immobilized partner concentration (10^-6M): 10

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-18

Number of measurements: 2

The affinity was below the detection threshold of the assay.

PUBMED ID: 38995680

Experiment series 21

Protein A

Protein: RBMX
Fragment: 91-105
Site: PxxP_3
Sequence: SGRRGPPPPPRSRGP
Construct: Bio Ado Ado-SGRRGPPPPPRSRGP-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: T532M
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: 0.46

Immobilized partner concentration (10^-6M): 18

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-16

Number of measurements: 1

Measured pK_d: 4.72

PUBMED ID: 38995680

Experiment series 22

Protein A

Protein: RBMX
Fragment: 90-104
Site: PxxP_2
Sequence: ESGRRGPPPPPRSRG
Construct: Bio Ado Ado-ESGRRGPPPPPRSRG-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: T532M
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: 0.46

Holdup BI standard deviation: 0.01

Immobilized partner concentration (10^-6M): 18

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-16

Number of measurements: 2

Measured pK_d: 4.72

PUBMED ID: 38995680

Experiment series 23

Protein A

Protein: RBMX
Fragment: 161-175
Site: PxxP_1
Sequence: PPKRSAPSGPVRSSS
Construct: Bio Ado Ado-PPKRSAPSGPVRSSS-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: T532M
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: -0.03

Holdup BI standard deviation: 0.02

Immobilized partner concentration (10^-6M): 18

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-16

Number of measurements: 2

The affinity was below the detection threshold of the assay.

PUBMED ID: 38995680

Experiment series 24

Protein A

Protein: RBMX
Fragment: 90-104
Site: PxxP_2
Sequence: ESGRRGPPPPPRSRG
Construct: Bio Ado Ado-ESGRRGPPPPPRSRG-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: V566M
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: 0.47

Holdup BI standard deviation: 0

Immobilized partner concentration (10^-6M): 18

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-18

Number of measurements: 2

Measured pK_d: 4.73

PUBMED ID: 38995680

Experiment series 25

Protein A

Protein: RBMX
Fragment: 91-105
Site: PxxP_3
Sequence: SGRRGPPPPPRSRGP
Construct: Bio Ado Ado-SGRRGPPPPPRSRGP-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: V566M
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: 0.46

Immobilized partner concentration (10^-6M): 18

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-18

Number of measurements: 1

Measured pK_d: 4.73

PUBMED ID: 38995680

Experiment series 26

Protein A

Protein: RBMX
Fragment: 161-175
Site: PxxP_1
Sequence: PPKRSAPSGPVRSSS
Construct: Bio Ado Ado-PPKRSAPSGPVRSSS-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: V566M
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: -0

Holdup BI standard deviation: 0.01

Immobilized partner concentration (10^-6M): 18

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-18

Number of measurements: 2

The affinity was below the detection threshold of the assay.

PUBMED ID: 38995680

Experiment series 27

Protein A

Protein: RBMX
Fragment: 90-104
Site: PxxP_2
Sequence: ESGRRGPPPPPRSRG
Construct: Bio Ado Ado-ESGRRGPPPPPRSRG-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: V583I
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: 0.28

Holdup BI standard deviation: 0.01

Immobilized partner concentration (10^-6M): 13

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-17

Number of measurements: 2

Measured pK_d: 4.52

PUBMED ID: 38995680

Experiment series 28

Protein A

Protein: RBMX
Fragment: 91-105
Site: PxxP_3
Sequence: SGRRGPPPPPRSRGP
Construct: Bio Ado Ado-SGRRGPPPPPRSRGP-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: V583I
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: 0.28

Immobilized partner concentration (10^-6M): 13

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-17

Number of measurements: 1

Measured pK_d: 4.52

PUBMED ID: 38995680

Experiment series 29

Protein A

Protein: RBMX
Fragment: 161-175
Site: PxxP_1
Sequence: PPKRSAPSGPVRSSS
Construct: Bio Ado Ado-PPKRSAPSGPVRSSS-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: V583I
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: -0.02

Holdup BI standard deviation: 0.01

Immobilized partner concentration (10^-6M): 13

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-17

Number of measurements: 2

The affinity was below the detection threshold of the assay.

PUBMED ID: 38995680

Experiment series 30

Protein A

Protein: RBMX
Fragment: 90-104
Site: PxxP_2
Sequence: ESGRRGPPPPPRSRG
Construct: Bio Ado Ado-ESGRRGPPPPPRSRG-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: Y531S
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: 0.07

Holdup BI standard deviation: 0

Immobilized partner concentration (10^-6M): 18

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-18

Number of measurements: 2

Measured pK_d: 3.61

PUBMED ID: 38995680

Experiment series 31

Protein A

Protein: RBMX
Fragment: 161-175
Site: PxxP_1
Sequence: PPKRSAPSGPVRSSS
Construct: Bio Ado Ado-PPKRSAPSGPVRSSS-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: Y531S
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: -0.03

Holdup BI standard deviation: 0

Immobilized partner concentration (10^-6M): 18

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-18

Number of measurements: 2

The affinity was below the detection threshold of the assay.

PUBMED ID: 38995680

Experiment series 32

Protein A

Protein: RBMX
Fragment: 91-105
Site: PxxP_3
Sequence: SGRRGPPPPPRSRGP
Construct: Bio Ado Ado-SGRRGPPPPPRSRGP-CONH2

Protein B

Protein: BIN1
Fragment: 513-593
Site: SH3
Modification: Y531S
Construct: his6-MBP-TEVsite-SH3

Average holdup BI: 0.02

Immobilized partner concentration (10^-6M): 18

Experiment method: HU (DAPF)

Details of affinity fitting: Quadratic binding equation

Date of measurement: 2023-01-18

Number of measurements: 1

The affinity was below the detection threshold of the assay.

PUBMED ID: 38995680