Interaction Details


Details of experiments between P22460 and Q12959
Note that the results of all experiments are listed, regardless of the modification states of the fragments.


Experiment series 1

Protein A

Protein: KCNA5
Fragment: 604-613
Site: PBM
Sequence: CLDTSRETDL
Construct: biotin-ttds-CLDTSRETDL

Protein B

Protein: DLG1
Fragment: 314-412
Site: PDZ_2
Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.44
Normalized holdup BI: 0.5
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pKd: 4.79
PUBMED ID: 36115835

Experiment series 2

Protein A

Protein: KCNA5
Fragment: 604-613
Site: PBM
Sequence: CLDTSRETDL
Construct: biotin-ttds-CLDTSRETDL

Protein B

Protein: DLG1
Fragment: 314-412
Site: PDZ_2
Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.29
Immobilized partner concentration (10-6M): 10
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
Number of measurements: 1
Measured pKd: 4.67
PUBMED ID: 36115835

Experiment series 3

Protein A

Protein: KCNA5
Fragment: 604-613
Site: PBM
Sequence: CLDTSRETDL
Construct: biotin-ttds-CLDTSRETDL

Protein B

Protein: DLG1
Fragment: 221-314
Site: PDZ_1
Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.08
Normalized holdup BI: 0.1
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pKd: 3.79
PUBMED ID: 36115835

Experiment series 4

Protein A

Protein: KCNA5
Fragment: 604-613
Site: PBM
Sequence: CLDTSRETDL
Construct: biotin-ttds-CLDTSRETDL

Protein B

Protein: DLG1
Fragment: 457-570
Site: PDZ_3
Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.05
Normalized holdup BI: 0.06
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pKd: 3.57
PUBMED ID: 36115835

Experiment series 5

Protein A

Protein: KCNA5
Fragment: 604-613
Site: PBM
Sequence: CLDTSRETDL
Construct: biotin-ttds-CLDTSRETDL

Protein B

Protein: DLG1
Fragment: 221-314
Site: PDZ_1
Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.01
Immobilized partner concentration (10-6M): 10
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
PUBMED ID: 36115835

Experiment series 6

Protein A

Protein: KCNA5
Fragment: 604-613
Site: PBM
Sequence: CLDTSRETDL
Construct: biotin-ttds-CLDTSRETDL

Protein B

Protein: DLG1
Fragment: 457-570
Site: PDZ_3
Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.02
Immobilized partner concentration (10-6M): 10
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
PUBMED ID: 36115835