Interaction Details


Details of experiments between P20020 and Q9NUP9
Note that the results of all experiments are listed, regardless of the modification states of the fragments.


Experiment series 1

Protein A

Protein: ATP2B1
Fragment: 1211-1220
Site: PBM
Sequence: SPLHSLETSL
Construct: Biotin-ado-ado-SPLHSLETSL

Protein B

Protein: LIN7C
Fragment: 85-176
Site: PDZ
Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.33
Normalized holdup BI: 0.37
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pKd: 4.54
PUBMED ID: 36115835
Experimental Details

Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6

Experiment series 2

Protein A

Protein: ATP2B1
Fragment: 1211-1220
Site: PBM
Sequence: SPLHSLETSL
Construct: biotin-ttds-SPLHSLETSL

Protein B

Protein: LIN7C
Fragment: 85-176
Site: PDZ
Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.2
Holdup BI standard deviation: 0.04
Normalized holdup BI: 0.32
Normalized holdup BI standard deviation: 0.07
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 2
Measured pKd: 4.45
PUBMED ID: 36115835