Details of experiments between O75970 and Q13574 Note that the results of all experiments are listed, regardless of the modification states of the fragments.
Experiment series 1 Protein A Protein: MPDZ Fragment: 1624-1716 Site: PDZ_10 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: DGKZ Fragment: 919-928 Site: PBM Sequence: IQREDQETAV Construct: biotin-ttds-IQREDQETAV
Average holdup BI: 0.1
Immobilized partner concentration (10-6 M): 6
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
Number of measurements: 1
Measured pK d : 4.32
Experiment series 2 Protein A Protein: MPDZ Fragment: 1141-1246 Site: PDZ_7 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: DGKZ Fragment: 919-928 Site: PBM Sequence: IQREDQETAV Construct: biotin-ttds-IQREDQETAV
Average holdup BI: -0.02
Immobilized partner concentration (10-6 M): 6
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 3 Protein A Protein: MPDZ Fragment: 120-230 Site: PDZ_1 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: DGKZ Fragment: 919-928 Site: PBM Sequence: IQREDQETAV Construct: biotin-ttds-IQREDQETAV
Average holdup BI: 0.03
Immobilized partner concentration (10-6 M): 6
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 4 Protein A Protein: MPDZ Fragment: 1325-1441 Site: PDZ_8 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: DGKZ Fragment: 919-928 Site: PBM Sequence: IQREDQETAV Construct: biotin-ttds-IQREDQETAV
Average holdup BI: -0.03
Immobilized partner concentration (10-6 M): 6
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 5 Protein A Protein: MPDZ Fragment: 1464-1572 Site: PDZ_9 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: DGKZ Fragment: 919-928 Site: PBM Sequence: IQREDQETAV Construct: biotin-ttds-IQREDQETAV
Average holdup BI: -0.08
Immobilized partner concentration (10-6 M): 6
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 6 Protein A Protein: MPDZ Fragment: 1624-1716 Site: PDZ_10 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: DGKZ Fragment: 919-928 Site: PBM Sequence: IQREDQETAV Construct: biotin-ttds-IQREDQETAV
Average holdup BI: -0.02
Normalized holdup BI: -0.02
Immobilized partner concentration (10-6 M): 13.5
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 7 Protein A Protein: MPDZ Fragment: 1624-1716 Site: PDZ_10 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: DGKZ Fragment: 919-928 Site: PBM Sequence: IQREDQETAV Construct: biotin-ttds-IQREDQETAV
Average holdup BI: -0.01
Normalized holdup BI: -0.01
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #6
Experiment series 8 Protein A Protein: MPDZ Fragment: 1722-1810 Site: PDZ_11 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: DGKZ Fragment: 919-928 Site: PBM Sequence: IQREDQETAV Construct: biotin-ttds-IQREDQETAV
Average holdup BI: 0.03
Immobilized partner concentration (10-6 M): 6
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 9 Protein A Protein: MPDZ Fragment: 1858-1949 Site: PDZ_12 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: DGKZ Fragment: 919-928 Site: PBM Sequence: IQREDQETAV Construct: biotin-ttds-IQREDQETAV
Average holdup BI: -0.02
Immobilized partner concentration (10-6 M): 6
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 10 Protein A Protein: MPDZ Fragment: 1858-1949 Site: PDZ_12 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: DGKZ Fragment: 919-928 Site: PBM Sequence: IQREDQETAV Construct: biotin-ttds-IQREDQETAV
Average holdup BI: 0.01
Normalized holdup BI: 0.01
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #6
Experiment series 11 Protein A Protein: MPDZ Fragment: 1858-1949 Site: PDZ_12 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: DGKZ Fragment: 919-928 Site: PBM Sequence: IQREDQETAV Construct: biotin-ttds-IQREDQETAV
Average holdup BI: 0.01
Normalized holdup BI: 0.01
Immobilized partner concentration (10-6 M): 13.5
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 12 Protein A Protein: MPDZ Fragment: 1982-2070 Site: PDZ_13 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: DGKZ Fragment: 919-928 Site: PBM Sequence: IQREDQETAV Construct: biotin-ttds-IQREDQETAV
Average holdup BI: -0.13
Immobilized partner concentration (10-6 M): 6
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 13 Protein A Protein: MPDZ Fragment: 246-342 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: DGKZ Fragment: 919-928 Site: PBM Sequence: IQREDQETAV Construct: biotin-ttds-IQREDQETAV
Average holdup BI: -0.03
Immobilized partner concentration (10-6 M): 6
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 14 Protein A Protein: MPDZ Fragment: 371-467 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: DGKZ Fragment: 919-928 Site: PBM Sequence: IQREDQETAV Construct: biotin-ttds-IQREDQETAV
Average holdup BI: 0.01
Immobilized partner concentration (10-6 M): 6
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 15 Protein A Protein: MPDZ Fragment: 548-634 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: DGKZ Fragment: 919-928 Site: PBM Sequence: IQREDQETAV Construct: biotin-ttds-IQREDQETAV
Average holdup BI: -0.03
Immobilized partner concentration (10-6 M): 6
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 16 Protein A Protein: MPDZ Fragment: 688-793 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: DGKZ Fragment: 919-928 Site: PBM Sequence: IQREDQETAV Construct: biotin-ttds-IQREDQETAV
Average holdup BI: -0.05
Normalized holdup BI: -0.05
Immobilized partner concentration (10-6 M): 13.5
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 17 Protein A Protein: MPDZ Fragment: 688-793 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: DGKZ Fragment: 919-928 Site: PBM Sequence: IQREDQETAV Construct: biotin-ttds-IQREDQETAV
Average holdup BI: -0.02
Normalized holdup BI: -0.02
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #6
Experiment series 18 Protein A Protein: MPDZ Fragment: 688-793 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: DGKZ Fragment: 919-928 Site: PBM Sequence: IQREDQETAV Construct: biotin-ttds-IQREDQETAV
Average holdup BI: 0.04
Immobilized partner concentration (10-6 M): 6
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 19 Protein A Protein: MPDZ Fragment: 998-1105 Site: PDZ_6 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: DGKZ Fragment: 919-928 Site: PBM Sequence: IQREDQETAV Construct: biotin-ttds-IQREDQETAV
Average holdup BI: -0.03
Immobilized partner concentration (10-6 M): 6
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Please cite ProfAff! (Gogl, G. et al., Nature Communications 2022)
© The ProfAff database is developped by the research team of Gergo Gogl .