Details of experiments between O75970 and P60484 Note that the results of all experiments are listed, regardless of the modification states of the fragments.
Experiment series 1 Protein A Protein: MPDZ Fragment: 1624-1716 Site: PDZ_10 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Average holdup BI: 0.49
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
Measured pK d : 4.81
Experiment series 2 Protein A Protein: MPDZ Fragment: 1141-1246 Site: PDZ_7 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Average holdup BI: 0.23
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
Measured pK d : 4.27
Experiment series 3 Protein A Protein: MPDZ Fragment: 1982-2070 Site: PDZ_13 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Average holdup BI: 0.23
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
Measured pK d : 4.26
Experiment series 4 Protein A Protein: MPDZ Fragment: 371-467 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Average holdup BI: 0.14
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
Measured pK d : 3.99
Experiment series 5 Protein A Protein: MPDZ Fragment: 1624-1716 Site: PDZ_10 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Average holdup BI: 0.15
Normalized holdup BI: 0.15
Immobilized partner concentration (10-6 M): 19
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.98
Experiment series 6 Protein A Protein: MPDZ Fragment: 1141-1246 Site: PDZ_7 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Average holdup BI: 0.15
Immobilized partner concentration (10-6 M): 36
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
Measured pK d : 3.71
Experiment series 7 Protein A Protein: MPDZ Fragment: 1624-1716 Site: PDZ_10 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 394-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ado-ado-EDQHTQITKV
Average holdup BI: 0.08
Normalized holdup BI: 0.08
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.7
Experimental Details Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
Experiment series 8 Protein A Protein: MPDZ Fragment: 1325-1441 Site: PDZ_8 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Average holdup BI: 0.12
Immobilized partner concentration (10-6 M): 36
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
Measured pK d : 3.58
Experiment series 9 Protein A Protein: MPDZ Fragment: 688-793 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Average holdup BI: 0.05
Normalized holdup BI: 0.05
Immobilized partner concentration (10-6 M): 19
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.46
Experiment series 10 Protein A Protein: MPDZ Fragment: 120-230 Site: PDZ_1 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Average holdup BI: 0.01
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 11 Protein A Protein: MPDZ Fragment: 120-230 Site: PDZ_1 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Average holdup BI: 0.04
Immobilized partner concentration (10-6 M): 36
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 12 Protein A Protein: MPDZ Fragment: 1325-1441 Site: PDZ_8 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Average holdup BI: 0.04
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 13 Protein A Protein: MPDZ Fragment: 1464-1572 Site: PDZ_9 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Average holdup BI: -0.02
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 14 Protein A Protein: MPDZ Fragment: 1464-1572 Site: PDZ_9 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Average holdup BI: -0.08
Immobilized partner concentration (10-6 M): 36
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 15 Protein A Protein: MPDZ Fragment: 1722-1810 Site: PDZ_11 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Average holdup BI: 0.01
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 16 Protein A Protein: MPDZ Fragment: 1722-1810 Site: PDZ_11 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Average holdup BI: 0.02
Immobilized partner concentration (10-6 M): 36
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 17 Protein A Protein: MPDZ Fragment: 1858-1949 Site: PDZ_12 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Average holdup BI: 0.02
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 18 Protein A Protein: MPDZ Fragment: 1858-1949 Site: PDZ_12 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Average holdup BI: 0.03
Normalized holdup BI: 0.03
Immobilized partner concentration (10-6 M): 19
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 19 Protein A Protein: MPDZ Fragment: 1858-1949 Site: PDZ_12 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 394-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ado-ado-EDQHTQITKV
Average holdup BI: -0.01
Normalized holdup BI: -0.01
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
Experiment series 20 Protein A Protein: MPDZ Fragment: 246-342 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Average holdup BI: 0.1
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 21 Protein A Protein: MPDZ Fragment: 246-342 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Average holdup BI: -0.04
Immobilized partner concentration (10-6 M): 36
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 22 Protein A Protein: MPDZ Fragment: 371-467 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Average holdup BI: 0.08
Immobilized partner concentration (10-6 M): 36
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 23 Protein A Protein: MPDZ Fragment: 548-634 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Average holdup BI: 0.04
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 24 Protein A Protein: MPDZ Fragment: 548-634 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Average holdup BI: -0.04
Immobilized partner concentration (10-6 M): 36
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 25 Protein A Protein: MPDZ Fragment: 688-793 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Average holdup BI: -0
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 26 Protein A Protein: MPDZ Fragment: 688-793 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Average holdup BI: 0.09
Immobilized partner concentration (10-6 M): 36
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 27 Protein A Protein: MPDZ Fragment: 688-793 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 394-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ado-ado-EDQHTQITKV
Average holdup BI: -0.01
Normalized holdup BI: -0.01
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
Experiment series 28 Protein A Protein: MPDZ Fragment: 998-1105 Site: PDZ_6 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 391-403 Site: PBM Sequence: EDQHTQITKV Construct: Biotin-ttds-PFDEDQHTQITKV
Average holdup BI: -0.03
Immobilized partner concentration (10-6 M): 17
Experiment method: CALIP_holdup
Details of affinity fitting: lysozyme internal standard
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 29 Protein A Protein: MPDZ Fragment: 998-1105 Site: PDZ_6 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKV
Average holdup BI: -0.03
Immobilized partner concentration (10-6 M): 36
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 30 Protein A Protein: MPDZ Fragment: 1141-1246 Site: PDZ_7 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Average holdup BI: 0.62
Immobilized partner concentration (10-6 M): 29
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
Measured pK d : 4.8
Experiment series 31 Protein A Protein: MPDZ Fragment: 1624-1716 Site: PDZ_10 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Average holdup BI: 0.39
Immobilized partner concentration (10-6 M): 29
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
Measured pK d : 4.37
Experiment series 32 Protein A Protein: MPDZ Fragment: 246-342 Site: PDZ_2 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Average holdup BI: 0.35
Immobilized partner concentration (10-6 M): 29
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
Measured pK d : 4.3
Experiment series 33 Protein A Protein: MPDZ Fragment: 1982-2070 Site: PDZ_13 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Average holdup BI: 0.35
Immobilized partner concentration (10-6 M): 29
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
Measured pK d : 4.29
Experiment series 34 Protein A Protein: MPDZ Fragment: 1624-1716 Site: PDZ_10 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Average holdup BI: 0.23
Normalized holdup BI: 0.23
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 4.27
Experimental Details not reported internal standards of holdup layout #5
Experiment series 35 Protein A Protein: MPDZ Fragment: 1624-1716 Site: PDZ_10 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Average holdup BI: 0.2
Normalized holdup BI: 0.2
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 4.18
Experiment series 36 Protein A Protein: MPDZ Fragment: 1624-1716 Site: PDZ_10 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Average holdup BI: 0.12
Normalized holdup BI: 0.12
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.91
Experimental Details not reported internal standards of holdup layout #6
Experiment series 37 Protein A Protein: MPDZ Fragment: 1325-1441 Site: PDZ_8 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Average holdup BI: 0.17
Immobilized partner concentration (10-6 M): 29
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
Measured pK d : 3.87
Experiment series 38 Protein A Protein: MPDZ Fragment: 1722-1810 Site: PDZ_11 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Average holdup BI: 0.15
Immobilized partner concentration (10-6 M): 29
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
Measured pK d : 3.78
Experiment series 39 Protein A Protein: MPDZ Fragment: 1858-1949 Site: PDZ_12 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Average holdup BI: 0.08
Normalized holdup BI: 0.08
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pK d : 3.68
Experimental Details not reported internal standards of holdup layout #6
Experiment series 40 Protein A Protein: MPDZ Fragment: 120-230 Site: PDZ_1 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Average holdup BI: 0.07
Immobilized partner concentration (10-6 M): 29
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 41 Protein A Protein: MPDZ Fragment: 1464-1572 Site: PDZ_9 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Average holdup BI: 0.02
Immobilized partner concentration (10-6 M): 29
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 42 Protein A Protein: MPDZ Fragment: 1858-1949 Site: PDZ_12 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Average holdup BI: -0.01
Normalized holdup BI: -0.01
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #5
Experiment series 43 Protein A Protein: MPDZ Fragment: 1858-1949 Site: PDZ_12 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Average holdup BI: 0.02
Immobilized partner concentration (10-6 M): 29
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 44 Protein A Protein: MPDZ Fragment: 1858-1949 Site: PDZ_12 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Average holdup BI: 0.02
Normalized holdup BI: 0.02
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 45 Protein A Protein: MPDZ Fragment: 371-467 Site: PDZ_3 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Average holdup BI: 0
Immobilized partner concentration (10-6 M): 29
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 46 Protein A Protein: MPDZ Fragment: 548-634 Site: PDZ_4 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Average holdup BI: 0.03
Immobilized partner concentration (10-6 M): 29
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 47 Protein A Protein: MPDZ Fragment: 688-793 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Average holdup BI: -0.01
Immobilized partner concentration (10-6 M): 29
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 48 Protein A Protein: MPDZ Fragment: 688-793 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Average holdup BI: 0
Normalized holdup BI: 0
Immobilized partner concentration (10-6 M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #6
Experiment series 49 Protein A Protein: MPDZ Fragment: 688-793 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Average holdup BI: 0.02
Normalized holdup BI: 0.02
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experimental Details not reported internal standards of holdup layout #5
Experiment series 50 Protein A Protein: MPDZ Fragment: 688-793 Site: PDZ_5 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Average holdup BI: 0.05
Normalized holdup BI: 0.05
Immobilized partner concentration (10-6 M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 51 Protein A Protein: MPDZ Fragment: 998-1105 Site: PDZ_6 Construct: his6-MBP-TEVsite-PDZ
Protein B Protein: PTEN Fragment: 393-403 Site: PBM Modification: (ALY)402 Sequence: EDQHTQITKV Construct: biotin-ttds-DEDQHTQITKacV
Average holdup BI: -0.06
Immobilized partner concentration (10-6 M): 29
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Please cite ProfAff! (Gogl, G. et al., Nature Communications 2022)
© The ProfAff database is developped by the research team of Gergo Gogl .