Details of experiments between  O75970  and P06427  Note that the results of all experiments are listed, regardless of the modification states of the fragments.
   Experiment series 1 Protein A Protein: MPDZ  Fragment: 1141-1246  Site: PDZ_7  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: HPV33-E6  Fragment: 140-149  Site: PBM  Sequence: SRSRRRETAL  Construct: biotin-ttds-SRSRRRETAL 
Average holdup BI:  0.08 
Immobilized partner concentration (10-6 M):  7 
Experiment method:  SAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normal layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
    Experiment series 2 Protein A Protein: MPDZ  Fragment: 120-230  Site: PDZ_1  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: HPV33-E6  Fragment: 140-149  Site: PBM  Sequence: SRSRRRETAL  Construct: biotin-ttds-SRSRRRETAL 
Average holdup BI:  0.04 
Immobilized partner concentration (10-6 M):  7 
Experiment method:  SAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normal layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 3 Protein A Protein: MPDZ  Fragment: 1325-1441  Site: PDZ_8  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: HPV33-E6  Fragment: 140-149  Site: PBM  Sequence: SRSRRRETAL  Construct: biotin-ttds-SRSRRRETAL 
Average holdup BI:  0.01 
Immobilized partner concentration (10-6 M):  7 
Experiment method:  SAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normal layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 4 Protein A Protein: MPDZ  Fragment: 1464-1572  Site: PDZ_9  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: HPV33-E6  Fragment: 140-149  Site: PBM  Sequence: SRSRRRETAL  Construct: biotin-ttds-SRSRRRETAL 
Average holdup BI:  0.02 
Immobilized partner concentration (10-6 M):  7 
Experiment method:  SAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normal layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 5 Protein A Protein: MPDZ  Fragment: 1624-1716  Site: PDZ_10  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: HPV33-E6  Fragment: 140-149  Site: PBM  Sequence: SRSRRRETAL  Construct: biotin-ttds-SRSRRRETAL 
Average holdup BI:  0.04 
Normalized holdup BI:  0.04 
Immobilized partner concentration (10-6 M):  20.2 
Experiment method:  DAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 6 Protein A Protein: MPDZ  Fragment: 1624-1716  Site: PDZ_10  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: HPV33-E6  Fragment: 140-149  Site: PBM  Sequence: SRSRRRETAL  Construct: biotin-ttds-SRSRRRETAL 
Average holdup BI:  0.09 
Immobilized partner concentration (10-6 M):  7 
Experiment method:  SAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normal layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 7 Protein A Protein: MPDZ  Fragment: 1722-1810  Site: PDZ_11  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: HPV33-E6  Fragment: 140-149  Site: PBM  Sequence: SRSRRRETAL  Construct: biotin-ttds-SRSRRRETAL 
Average holdup BI:  0 
Immobilized partner concentration (10-6 M):  7 
Experiment method:  SAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normal layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 8 Protein A Protein: MPDZ  Fragment: 1858-1949  Site: PDZ_12  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: HPV33-E6  Fragment: 140-149  Site: PBM  Sequence: SRSRRRETAL  Construct: biotin-ttds-SRSRRRETAL 
Average holdup BI:  -0.03 
Normalized holdup BI:  -0.03 
Immobilized partner concentration (10-6 M):  20.2 
Experiment method:  DAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 9 Protein A Protein: MPDZ  Fragment: 1858-1949  Site: PDZ_12  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: HPV33-E6  Fragment: 140-149  Site: PBM  Sequence: SRSRRRETAL  Construct: biotin-ttds-SRSRRRETAL 
Average holdup BI:  0.01 
Immobilized partner concentration (10-6 M):  7 
Experiment method:  SAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normal layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 10 Protein A Protein: MPDZ  Fragment: 1982-2070  Site: PDZ_13  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: HPV33-E6  Fragment: 140-149  Site: PBM  Sequence: SRSRRRETAL  Construct: biotin-ttds-SRSRRRETAL 
Average holdup BI:  0.01 
Immobilized partner concentration (10-6 M):  7 
Experiment method:  SAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normal layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 11 Protein A Protein: MPDZ  Fragment: 246-342  Site: PDZ_2  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: HPV33-E6  Fragment: 140-149  Site: PBM  Sequence: SRSRRRETAL  Construct: biotin-ttds-SRSRRRETAL 
Average holdup BI:  -0.19 
Immobilized partner concentration (10-6 M):  7 
Experiment method:  SAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normal layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 12 Protein A Protein: MPDZ  Fragment: 371-467  Site: PDZ_3  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: HPV33-E6  Fragment: 140-149  Site: PBM  Sequence: SRSRRRETAL  Construct: biotin-ttds-SRSRRRETAL 
Average holdup BI:  -0.04 
Immobilized partner concentration (10-6 M):  7 
Experiment method:  SAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normal layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 13 Protein A Protein: MPDZ  Fragment: 548-634  Site: PDZ_4  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: HPV33-E6  Fragment: 140-149  Site: PBM  Sequence: SRSRRRETAL  Construct: biotin-ttds-SRSRRRETAL 
Average holdup BI:  -0.01 
Immobilized partner concentration (10-6 M):  7 
Experiment method:  SAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normal layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 14 Protein A Protein: MPDZ  Fragment: 688-793  Site: PDZ_5  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: HPV33-E6  Fragment: 140-149  Site: PBM  Sequence: SRSRRRETAL  Construct: biotin-ttds-SRSRRRETAL 
Average holdup BI:  -0.06 
Immobilized partner concentration (10-6 M):  7 
Experiment method:  SAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normal layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 15 Protein A Protein: MPDZ  Fragment: 688-793  Site: PDZ_5  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: HPV33-E6  Fragment: 140-149  Site: PBM  Sequence: SRSRRRETAL  Construct: biotin-ttds-SRSRRRETAL 
Average holdup BI:  -0 
Normalized holdup BI:  -0 
Immobilized partner concentration (10-6 M):  20.2 
Experiment method:  DAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 16 Protein A Protein: MPDZ  Fragment: 998-1105  Site: PDZ_6  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: HPV33-E6  Fragment: 140-149  Site: PBM  Sequence: SRSRRRETAL  Construct: biotin-ttds-SRSRRRETAL 
Average holdup BI:  -0.05 
Immobilized partner concentration (10-6 M):  7 
Experiment method:  SAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normal layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 17 Protein A Protein: MPDZ  Fragment: 1624-1716  Site: PDZ_10  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: HPV33-E6  Fragment: 140-149  Site: PBM  Modification: (TPO)147  Sequence: SRSRRRETAL  Construct: Biotin-ttds-SRSRRREpTAL 
Average holdup BI:  -0.02 
Normalized holdup BI:  -0.02 
Immobilized partner concentration (10-6 M):  18 
Experiment method:  DAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 18 Protein A Protein: MPDZ  Fragment: 1858-1949  Site: PDZ_12  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: HPV33-E6  Fragment: 140-149  Site: PBM  Modification: (TPO)147  Sequence: SRSRRRETAL  Construct: Biotin-ttds-SRSRRREpTAL 
Average holdup BI:  0.02 
Normalized holdup BI:  0.02 
Immobilized partner concentration (10-6 M):  18 
Experiment method:  DAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
   Experiment series 19 Protein A Protein: MPDZ  Fragment: 688-793  Site: PDZ_5  Construct: his6-MBP-TEVsite-PDZ 
Protein B Protein: HPV33-E6  Fragment: 140-149  Site: PBM  Modification: (TPO)147  Sequence: SRSRRRETAL  Construct: Biotin-ttds-SRSRRREpTAL 
Average holdup BI:  -0.01 
Normalized holdup BI:  -0.01 
Immobilized partner concentration (10-6 M):  18 
Experiment method:  DAPF_holdup 
Details of affinity fitting:  fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout 
Number of measurements:  1 
The affinity was below the detection threshold of the assay. 
    
 
Please cite ProfAff! (Gogl, G. et al., Nature Communications 2022)  
© The ProfAff database is developped by the research team of Gergo Gogl .