Interaction Details


Details of experiments between O43182 and P78352
Note that the results of all experiments are listed, regardless of the modification states of the fragments.


Experiment series 1

Protein A

Protein: ARHGAP6
Fragment: 965-974
Site: PBM
Sequence: NPDALPETLV
Construct: biotin-ttds-NPDALPETLV

Protein B

Protein: DLG4
Fragment: 155-249
Site: PDZ_2
Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.25
Normalized holdup BI: 0.32
Immobilized partner concentration (10-6M): 18.9
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pKd: 4.42
PUBMED ID: 36115835

Experiment series 2

Protein A

Protein: ARHGAP6
Fragment: 965-974
Site: PBM
Sequence: NPDALPETLV
Construct: biotin-ttds-NPDALPETLV

Protein B

Protein: DLG4
Fragment: 62-152
Site: PDZ_1
Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.17
Normalized holdup BI: 0.2
Immobilized partner concentration (10-6M): 18.9
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pKd: 4.13
PUBMED ID: 36115835

Experiment series 3

Protein A

Protein: ARHGAP6
Fragment: 965-974
Site: PBM
Sequence: NPDALPETLV
Construct: biotin-ttds-NPDALPETLV

Protein B

Protein: DLG4
Fragment: 306-403
Site: PDZ_3
Construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.04
Holdup BI standard deviation: 0.02
Normalized holdup BI: 0.05
Normalized holdup BI standard deviation: 0.02
Immobilized partner concentration (10-6M): 18.9
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 2
Measured pKd: 3.46
PUBMED ID: 36115835

Experiment series 4

Protein A

Protein: ARHGAP6
Fragment: 965-974
Site: PBM
Sequence: NPDALPETLV
Construct: biotin-ttds-NPDALPETLV

Protein B

Protein: DLG4
Fragment: 306-403
Site: PDZ_3
Construct: his6-MBP-TEVsite-PDZ
Measured dissociation constant (10-6M): 0
Experiment method: competitive FP
Details of affinity fitting: Competitive binding equation in ProFit
Number of measurements: 3
The affinity was below the detection threshold of the assay.
PUBMED ID: 36115835